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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 19 ✖

analysis 1

  • blastn · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
364187 364187 PRJNA168635_P_NODE_10461_length_255_cov_2.864078_g10046_i0 PRJNA168635 10461 255 2.864078 7.3033989 Coelomycidium sp. 1 TP-2011 945699 Fungi Fungi 121 6.259999999999999e-23   NTclustered gi|321173733|gb|HQ888714.1| 945699 g10046 i0 81.875 15.3490196078431 160 13 78 6 110 255 685 842 Coelomycidium sp. 1 TP-2011 18S ribosomal RNA gene, partial sequence blastn 3914 121 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes     Coelomycidium Coelomycidium sp. 1 TP-2011
364300 364300 PRJNA168635_P_NODE_15781_length_201_cov_15.151316_g15365_i0 PRJNA168635 15781 201 15.151316 30.45414516 Physoderma maydis 276838 Fungi Fungi 156 1.3e-33   NTclustered gi|626438334|ref|NR_119547.1| 276838 g15365 i0 90.164 57.726368159204 122 8 59 3 2 119 187 308 Physoderma maydis DUKE DUH0007932 ITS region; from reference material blastn 11603 156 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Physoderma Physoderma maydis
4882322 4882322 PRJNA168635_P_NODE_4824_length_384_cov_6.835821_g4420_i0 PRJNA168635 4824 384 6.835821 26.24955264 Blastocladiales 4805 Fungi Fungi 93.5 2.16e-14   NTclustered gi|2440036|emb|X90411.1| 4808 g4420 i0 92.424 17.8098958333333 66 4 33 1 320 384 2802 2867 B.emersonii DNA for 28S ribosomal RNA gene blastn 6839 93.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
5467912 5467912 PRJNA168635_P_NODE_32685_length_160_cov_9.072072_g32269_i0 PRJNA168635 32685 160 9.072072 14.5153152 Blastocladiales sp. 2692728 Fungi Fungi 193 7.489999999999999e-45   NTclustered gi|2468790988|gb|OQ702914.1| 2692728 g32269 i0 89.103 89.1 156 16 98 1 3 158 2306 2152 Blastocladiales sp. isolate PSC224 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14256 193 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales     Blastocladiales sp.
8018063 8018063 PRJNA168635_P_NODE_6487_length_332_cov_4.855124_g6076_i0 PRJNA168635 6487 332 4.855124 16.11901168 Coelomomyces stegomyiae 143960 Fungi Fungi 150 1.08e-31   NTclustered gi|82398116|gb|DQ273767.1| 143960 g6076 i0 81.868 48.5090361445783 182 29 74 4 133 310 2936 3117 Coelomomyces stegomyiae isolate AFTOL-ID 18 28S ribosomal RNA gene, partial sequence blastn 16105 150 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces stegomyiae
9292396 9292396 PRJNA168635_P_NODE_13408_length_221_cov_5.941860_g12992_i0 PRJNA168635 13408 221 5.94186 13.1315106 Allomyces arbusculus 64504 Fungi Fungi 124 4.09e-24   NTclustered gi|1405239019|ref|NG_027623.1| 64504 g12992 i0 88.462 50.1221719457014 104 11 47 1 118 221 1657 1555 Allomyces arbusculus UCBMG Brasil 2 28S rRNA gene, partial sequence; from reference material blastn 11077 124 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
10568739 10568739 PRJNA168635_P_NODE_3689_length_436_cov_4.925065_g3289_i0 PRJNA168635 3689 436 4.925065 21.4732834 Coelomycidium sp. 3 TP-2011 945701 Fungi Fungi 331 4.8300000000000004e-86   NTclustered gi|321173780|gb|HQ888761.1| 945701 g3289 i0 82.353 13.243119266055 408 46 90 17 39 429 1 399 Coelomycidium sp. 3 TP-2011 28S ribosomal RNA gene, partial sequence blastn 5774 331 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes     Coelomycidium Coelomycidium sp. 3 TP-2011
13118161 13118161 PRJNA168635_P_NODE_16591_length_196_cov_4.530612_g16175_i0 PRJNA168635 16591 196 4.530612 8.87999952 Coelomycidium sp. 3 TP-2011 945701 Fungi Fungi 222 1.22e-53   NTclustered gi|321173780|gb|HQ888761.1| 945701 g16175 i0 95.652 64.5561224489796 138 6 70 0 1 138 801 664 Coelomycidium sp. 3 TP-2011 28S ribosomal RNA gene, partial sequence blastn 12653 222 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes     Coelomycidium Coelomycidium sp. 3 TP-2011
13807707 13807707 PRJNA168635_P_NODE_32431_length_161_cov_26.973214_g32015_i0 PRJNA168635 32431 161 26.973214 43.42687454 Catenariaceae 109872 Fungi Fungi 198 1.6199999999999999e-46   NTclustered gi|574611861|gb|KF700244.1| 109876 g32015 i0 90.196 93.9813664596273 153 14 94 1 4 155 333 181 Catenaria anguillulae isolate CICR-Pra.Warud 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15131 200 0.99 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
15667193 15667193 PRJNA168635_P_NODE_16073_length_200_cov_0.947020_g15657_i0 PRJNA168635 16073 200 0.94702 1.89404 Blastocladiella emersonii 4808 Fungi Fungi 117 6.0700000000000005e-22   NTclustered gi|49066441|gb|AY635842.1| 4808 g15657 i0 95.833 38.085 72 3 36 0 129 200 1384 1313 Blastocladiella emersonii isolate AFTOL-ID 302 18S ribosomal RNA gene, partial sequence blastn 7617 117 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
15667630 15667630 PRJNA168635_P_NODE_9333_length_273_cov_4.901786_g8918_i0 PRJNA168635 9333 273 4.901786 13.38187578 Allomyces arbusculus 64504 Fungi Fungi 207 5.05e-49   NTclustered gi|1405239019|ref|NG_027623.1| 64504 g8918 i0 85.787 72 197 27 72 1 62 258 1467 1662 Allomyces arbusculus UCBMG Brasil 2 28S rRNA gene, partial sequence; from reference material blastn 19656 207 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
16941548 16941548 PRJNA168635_P_NODE_14274_length_213_cov_6.451220_g13858_i0 PRJNA168635 14274 213 6.45122 13.7410986 Coelomycidium sp. 1 TP-2011 945699 Fungi Fungi 174 3.83e-39   NTclustered gi|321173733|gb|HQ888714.1| 945699 g13858 i0 82.174 22.6431924882629 230 15 97 14 6 211 42 269 Coelomycidium sp. 1 TP-2011 18S ribosomal RNA gene, partial sequence blastn 4823 174 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes     Coelomycidium Coelomycidium sp. 1 TP-2011
16942038 16942038 PRJNA168635_P_NODE_9134_length_277_cov_3.342105_g8719_i0 PRJNA168635 9134 277 3.342105 9.25763085 Coelomycidium sp. 1 TP-2011 945699 Fungi Fungi 394 3.68e-105   NTclustered gi|321173733|gb|HQ888714.1| 945699 g8719 i0 97.807 97.1696750902527 228 5 82 0 50 277 1058 831 Coelomycidium sp. 1 TP-2011 18S ribosomal RNA gene, partial sequence blastn 26916 394 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes     Coelomycidium Coelomycidium sp. 1 TP-2011
17632022 17632022 PRJNA168635_P_NODE_8354_length_292_cov_6.835391_g7939_i0 PRJNA168635 8354 292 6.835391 19.95934172 Blastocladiaceae 4806 Fungi Fungi 207 5.46e-49   NTclustered gi|2440036|emb|X90411.1| 4808 g7939 i0 99.13 44.3698630136986 115 1 63 0 178 292 2311 2425 B.emersonii DNA for 28S ribosomal RNA gene blastn 12956 207 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
19490239 19490239 PRJNA168635_P_NODE_12276_length_232_cov_30.147541_g11860_i0 PRJNA168635 12276 232 30.147541 69.94229512 Blastocladiella emersonii 4808 Fungi Fungi 89.8 1.58e-13   NTclustered gi|2440036|emb|X90411.1| 4808 g11860 i0 90.909 0.28448275862069 66 6 28 0 41 106 3624 3559 B.emersonii DNA for 28S ribosomal RNA gene blastn 66 89.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
19490453 19490453 PRJNA168635_P_NODE_23996_length_171_cov_3.606557_g23580_i0 PRJNA168635 23996 171 3.606557 6.16721247 Allomyces arbusculus 64504 Fungi Fungi 113 6.480000000000001e-21   NTclustered gi|1405239019|ref|NG_027623.1| 64504 g23580 i0 85.321 53.9824561403509 109 16 64 0 1 109 1557 1449 Allomyces arbusculus UCBMG Brasil 2 28S rRNA gene, partial sequence; from reference material blastn 9231 113 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
22041316 22041316 PRJNA168635_P_NODE_4698_length_389_cov_3.826471_g4294_i0 PRJNA168635 4698 389 3.826471 14.88497219 Blastocladiella emersonii 4808 Fungi Fungi 135 3.59e-27   NTclustered gi|2440036|emb|X90411.1| 4808 g4294 i0 89.623 25.452442159383 106 11 27 0 284 389 3371 3266 B.emersonii DNA for 28S ribosomal RNA gene blastn 9901 135 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
22731014 22731014 PRJNA168635_P_NODE_20878_length_179_cov_3.684615_g20462_i0 PRJNA168635 20878 179 3.684615 6.59546085 Allomyces 28581 Fungi Fungi 217 5.0799999999999996e-52   NTclustered gi|777407|gb|U23936.1|AMU23936 28583 g20462 i0 88.525 87.0502793296089 183 15 100 4 1 179 216 36 Allomyces macrogynus small subunit ribosomal RNA (rns) gene, complete sequence blastn 15582 217 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
25280198 25280198 PRJNA168635_P_NODE_13000_length_225_cov_3.568182_g12584_i0 PRJNA168635 13000 225 3.568182 8.0284095 Fungi 4751 Fungi Fungi 141 4.15e-29   NTclustered gi|321173721|gb|HQ888702.1| 945686 g12584 i0 90.654 43.3111111111111 107 9 47 1 2 107 1215 1321 Catenaria spinosa strain WM100 18S ribosomal RNA gene, partial sequence blastn 9745 141 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria spinosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;