RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA168635" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 1 ✖

bioproject 1

  • PRJNA168635 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_phylum 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10568366 10568366 PRJNA168635_P_NODE_13429_length_221_cov_3.633721_g13013_i0 PRJNA168635 13429 221 3.633721 8.03052341 uncultured Nanobdellati archaeon 2219213 Archaea Archaea 56.5 0.002   NTclustered gi|1572541192|emb|LR135915.1| 2219213 g13013 i0 100 0.135746606334842 30 0 14 0 36 65 41317 41346 uncultured DPANN archaeon genomic DNA containing deoA-rbcL-e2b2 region region blastn 30 56.5 1 Archaea   Nanobdellati           uncultured Nanobdellati archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;