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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 21 ✖

bioproject 1

  • PRJNA168635 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2914927 2914927 PRJNA168635_P_NODE_10523_length_254_cov_6.146341_g10108_i0 PRJNA168635 10523 254 6.146341 15.61170614 uncultured Methanoregula sp. 1005933 Archaea Archaea 455 1.5e-123   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g10108 i0 99.206 114.224409448819 252 2 99 0 1 252 1231938 1231687 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 29013 455 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
6156947 6156947 PRJNA168635_P_NODE_17605_length_191_cov_1.450704_g17189_i0 PRJNA168635 17605 191 1.450704 2.77084464 Halobacteriales 2235 Archaea Archaea 69.4 1.63e-7   NTclustered gi|222451341|gb|CP001365.1| 416348 g17189 i0 89.474 0.895287958115183 57 3 28 1 1 54 1574733 1574677 Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete sequence blastn 171 69.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum lacusprofundi
6742052 6742052 PRJNA168635_P_NODE_14406_length_212_cov_4.398773_g13990_i0 PRJNA168635 14406 212 4.398773 9.32539876 Methanothrix sp. 90426 Archaea Archaea 327 2.77e-85   NTclustered gi|2626216449|emb|OY821645.1| 90426 g13990 i0 94.762 34.5518867924528 210 11 99 0 1 210 826609 826818 MAG: Methanothrix sp. isolate d1628e35-7b52-4540-a147-c2ca1342adce genome assembly, chromosome: 1 blastn 7325 327 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
7432161 7432161 PRJNA168635_P_NODE_21966_length_176_cov_3.228346_g21550_i0 PRJNA168635 21966 176 3.228346 5.68188896 root 1 Root_unresolved Root_unresolved 309 7.98e-80   NTclustered gi|575790347|gb|KF697731.1| 2162 g21550 i0 98.305 101.522727272727 177 2 100 1 1 176 670 846 Methanobacterium sp. BRM9 16S ribosomal RNA gene, partial sequence blastn 17868 309 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium formicicum
8017954 8017954 PRJNA168635_P_NODE_32147_length_162_cov_0.920354_g31731_i0 PRJNA168635 32147 162 0.920354 1.49097348 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 300 4.36e-77   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g31731 i0 100 12.8456790123457 162 0 100 0 1 162 1503352 1503191 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 2081 300 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
10568722 10568722 PRJNA168635_P_NODE_34569_length_154_cov_3.428571_g34153_i0 PRJNA168635 34569 154 3.428571 5.27999934 Salinarchaeum sp. IM2453 2862870 Archaea Archaea 82.4 1.61e-11   NTclustered gi|2082835402|gb|CP081183.1| 2862870 g34153 i0 85.185 3.84415584415584 81 10 52 2 9 88 1215996 1216075 Salinarchaeum sp. IM2453 chromosome, complete genome blastn 592 82.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronoarchaeaceae Salinarchaeum Salinarchaeum sp. IM2453
11843331 11843331 PRJNA168635_P_NODE_6590_length_330_cov_1.359431_g6179_i0 PRJNA168635 6590 330 1.359431 4.4861223 Haloprofundus salilacus 2876190 Archaea Archaea 442 1.5799999999999993e-119   NTclustered gi|2101339616|gb|CP083723.1| 2876190 g6179 i0 91.589 179.824242424242 321 25 97 2 1 320 1068105 1068424 Haloprofundus salilacus strain Gai1-5 chromosome unnamed1, complete sequence blastn 59342 442 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloprofundus Haloprofundus salilacus
13807600 13807600 PRJNA168635_P_NODE_18691_length_187_cov_1.420290_g18275_i0 PRJNA168635 18691 187 1.42029 2.6559423 Methanobacterium 2160 Archaea Archaea 213 6.94e-51   NTclustered gi|584298067|gb|KF882006.1| 392018 g18275 i0 98.347 81.9732620320856 121 2 65 0 67 187 1065 945 Methanobacterium alcaliphilum strain WeN4 23S ribosomal RNA gene, partial sequence blastn 15329 213 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium alcaliphilum
16941669 16941669 PRJNA168635_P_NODE_20034_length_182_cov_1.924812_g19618_i0 PRJNA168635 20034 182 1.924812 3.50315784 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 337 3.82e-88   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g19618 i0 100 69.3021978021978 182 0 100 0 1 182 1504448 1504267 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 12613 337 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
16942016 16942016 PRJNA168635_P_NODE_7994_length_298_cov_5030.787149_g7580_i0 PRJNA168635 7994 298 5030.787149 14991.74570402 uncultured Methanoregula sp. 1005933 Archaea Archaea 536 6.269999999999998e-148   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g7580 i0 99.659 248.328859060403 293 1 98 0 1 293 3117413 3117121 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 74002 536 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
17631860 17631860 PRJNA168635_P_NODE_19354_length_184_cov_4.214815_g18938_i0 PRJNA168635 19354 184 4.214815 7.7552596 Methanobacterium 2160 Archaea Archaea 285 1.42e-72   NTclustered gi|584298059|gb|KF881998.1| 2161 g18938 i0 95.506 158.79347826087 178 8 97 0 7 184 1774 1951 Methanobacterium bryantii strain M.o.H. 23S ribosomal RNA gene, partial sequence blastn 29218 285 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium bryantii
18216056 18216056 PRJNA168635_P_NODE_1455_length_655_cov_2451.755776_g1120_i0 PRJNA168635 1455 655 2451.755776 16059.0003328 uncultured Methanoregula sp. 1005933 Archaea Archaea 658 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g1120 i0 88.225 161.377099236641 586 23 88 23 1 575 3117296 3117846 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 105702 658 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
18905653 18905653 PRJNA168635_P_NODE_19375_length_184_cov_3.481481_g18959_i0 PRJNA168635 19375 184 3.481481 6.40592504 Methanothrix 2222 Archaea Archaea 318 1.3999999999999995e-82   NTclustered gi|507148322|ref|NR_103125.1| 2223 g18959 i0 97.826 60.304347826087 184 4 100 0 1 184 1755 1938 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 11096 318 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
19490379 19490379 PRJNA168635_P_NODE_19076_length_185_cov_4.125000_g18660_i0 PRJNA168635 19076 185 4.125 7.63125 uncultured Methanolinea sp. 521103 Archaea Archaea 331 1.81e-86   NTclustered gi|310331053|gb|HQ049554.1| 521103 g18660 i0 98.919 99.8648648648649 185 2 100 0 1 185 28 212 Uncultured Methanolinea sp. clone F5OHPNU07IJ53S 16S ribosomal RNA gene, partial sequence blastn 18475 331 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanolinea uncultured Methanolinea sp.
19490504 19490504 PRJNA168635_P_NODE_27476_length_167_cov_0.881356_g27060_i0 PRJNA168635 27476 167 0.881356 1.47186452 Halarchaeum sp. CBA1220 1853682 Archaea Archaea 54.7 0.004   NTclustered gi|1864269003|gb|CP054707.1| 1853682 g27060 i0 96.875 0.191616766467066 32 1 19 0 105 136 120289 120320 Halarchaeum sp. CBA1220 chromosome, complete genome blastn 32 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halarchaeum Halarchaeum sp. CBA1220
20766238 20766238 PRJNA168635_P_NODE_3977_length_420_cov_7.816712_g3576_i0 PRJNA168635 3977 420 7.816712 32.8301904 Haloarcula hispanica 51589 Archaea Archaea 86.1 3.99e-12   NTclustered gi|772242000|gb|KP076307.1| 51589 g3576 i0 83.505 20.802380952381 97 10 23 6 179 273 1283 1191 Haloarcula hispanica strain RM-G12 16S ribosomal RNA gene, partial sequence blastn 8737 86.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula hispanica
22730941 22730941 PRJNA168635_P_NODE_11838_length_238_cov_0.941799_g11422_i0 PRJNA168635 11838 238 0.941799 2.24148162 Methanobacterium 2160 Archaea Archaea 335 1.9e-87   NTclustered gi|584298058|gb|KF881997.1| 256826 g11422 i0 92.05 147.453781512605 239 18 100 1 1 238 2135 2373 Methanobacterium aarhusense strain H2-LR 23S ribosomal RNA gene, partial sequence blastn 35094 335 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium aarhusense
23316571 23316571 PRJNA168635_P_NODE_21679_length_177_cov_1.921875_g21263_i0 PRJNA168635 21679 177 1.921875 3.40171875 Methanobacterium alcaliphilum 392018 Archaea Archaea 222 1.08e-53   NTclustered gi|584298067|gb|KF882006.1| 392018 g21263 i0 89.326 108.576271186441 178 18 100 1 1 177 1197 1374 Methanobacterium alcaliphilum strain WeN4 23S ribosomal RNA gene, partial sequence blastn 19218 222 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium alcaliphilum
23316612 23316612 PRJNA168635_P_NODE_24079_length_171_cov_2.295082_g23663_i0 PRJNA168635 24079 171 2.295082 3.92459022 Haloferacaceae archaeon 2080321 Archaea Archaea 189 1.0499999999999996e-43   NTclustered gi|2874253923|emb|OY970248.1| 2080321 g23663 i0 87.654 173.894736842105 162 20 95 0 10 171 49887 50048 MAG: Haloferacaceae archaeon isolate MFD01721.bin.c.6 genome assembly, chromosome: 1 blastn 29736 189 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae   Haloferacaceae archaeon
24590512 24590512 PRJNA168635_P_NODE_11460_length_242_cov_2.036269_g11044_i0 PRJNA168635 11460 242 2.036269 4.92777098 uncultured euryarchaeote 114243 Archaea Archaea 361 3.19e-95   NTclustered gi|619321767|gb|KJ566504.1| 114243 g11044 i0 93.443 96.8471074380165 244 14 100 1 1 242 199 442 Uncultured euryarchaeote clone S2D01344af 16S ribosomal RNA gene, partial sequence blastn 23437 361 1 Archaea   Methanobacteriati Methanobacteriota         uncultured euryarchaeote
24591026 24591026 PRJNA168635_P_NODE_7680_length_304_cov_1120.807843_g7267_i0 PRJNA168635 7680 304 1120.807843 3407.25584272 uncultured Methanoregula sp. 1005933 Archaea Archaea 473 5.1e-129   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g7267 i0 94.771 316.388157894737 306 12 100 4 1 304 3117478 3117175 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 96182 473 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;