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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_clade = "CRuMs"

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tax_superkingdom 1

tax_clade 1

  • CRuMs · 19 ✖

bioproject 1

  • PRJNA168635 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1639325 1639325 PRJNA168635_P_NODE_2602_length_511_cov_6.402597_g2216_i0 PRJNA168635 2602 511 6.402597 32.71727067 Collodictyon triciliatum 190325 Root_unresolved Root_unresolved 187 1.3099999999999999e-42   NTclustered gi|1200177733|gb|MF039367.1| 190325 g2216 i0 91.852 25.8512720156556 135 10 26 1 340 474 4886 4753 Collodictyon triciliatum isolate C_Arungen 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13210 187 1 Eukaryota CRuMs         Collodictyonidae Collodictyon Collodictyon triciliatum
4191822 4191822 PRJNA168635_P_NODE_6404_length_334_cov_15.512281_g5993_i0 PRJNA168635 6404 334 15.512281 51.81101854 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 163 1.39e-35   NTclustered gi|2733867142|gb|PP812521.1| 440571 g5993 i0 84.848 46.6347305389222 165 22 49 3 117 280 3541 3703 Uncultured Collodictyonidae isolate Col20 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15576 163 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
6742416 6742416 PRJNA168635_P_NODE_6386_length_335_cov_5.118881_g5975_i0 PRJNA168635 6386 335 5.118881 17.14825135 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 342 1.67e-89   NTclustered gi|300078503|gb|GU001165.1| 238746 g5975 i0 90.152 79.6656716417911 264 24 78 2 71 332 2524 2787 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 26688 342 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
8017979 8017979 PRJNA168635_P_NODE_33707_length_157_cov_2.675926_g33291_i0 PRJNA168635 33707 157 2.675926 4.20120382 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 261 1.98e-65   NTclustered gi|33641921|gb|AY268038.1| 238746 g33291 i0 96.815 97.9554140127389 157 4 100 1 1 157 1423 1268 Micronuclearia podoventralis small subunit ribosomal RNA gene, partial sequence blastn 15379 261 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
9292467 9292467 PRJNA168635_P_NODE_16928_length_194_cov_3.551724_g16512_i0 PRJNA168635 16928 194 3.551724 6.89034456 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 231 2e-56   NTclustered gi|300078503|gb|GU001165.1| 238746 g16512 i0 88.144 141.128865979381 194 23 100 0 1 194 3547 3740 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 27379 231 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
10568350 10568350 PRJNA168635_P_NODE_1269_length_698_cov_6.443760_g956_i0 PRJNA168635 1269 698 6.44376 44.9774448 Collodictyon triciliatum 190325 Root_unresolved Root_unresolved 180 3.06e-40   NTclustered gi|1200177733|gb|MF039367.1| 190325 g956 i0 91.045 31.067335243553 134 11 19 1 38 171 4753 4885 Collodictyon triciliatum isolate C_Arungen 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21685 180 1 Eukaryota CRuMs         Collodictyonidae Collodictyon Collodictyon triciliatum
10568436 10568436 PRJNA168635_P_NODE_16389_length_197_cov_16.844595_g15973_i0 PRJNA168635 16389 197 16.844595 33.18385215 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 259 9.37e-65   NTclustered gi|300078503|gb|GU001165.1| 238746 g15973 i0 90.404 101.060913705584 198 18 100 1 1 197 2227 2030 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19909 259 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
11843206 11843206 PRJNA168635_P_NODE_3090_length_474_cov_13.548235_g2696_i0 PRJNA168635 3090 474 13.548235 64.2186339 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 625 2.17e-174   NTclustered gi|300078503|gb|GU001165.1| 238746 g2696 i0 90.546 101.445147679325 476 39 100 6 1 474 3013 2542 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 48085 625 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
11843233 11843233 PRJNA168635_P_NODE_33210_length_158_cov_9.724771_g32794_i0 PRJNA168635 33210 158 9.724771 15.36513818 uncultured Micronuclearia 1595896 Root_unresolved Root_unresolved 270 3.3099999999999996e-68   NTclustered gi|1516250890|gb|MK177607.1| 1595896 g32794 i0 97.468 100.550632911392 158 4 100 0 1 158 1561 1404 Uncultured Micronuclearia clone DDI50.fa small subunit ribosomal RNA gene, partial sequence blastn 15887 270 1 Eukaryota CRuMs       Rigifilida   Micronuclearia uncultured Micronuclearia
11843238 11843238 PRJNA168635_P_NODE_33570_length_157_cov_4.416667_g33154_i0 PRJNA168635 33570 157 4.416667 6.93416719 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 169 1.23e-37   NTclustered gi|300078503|gb|GU001165.1| 238746 g33154 i0 85.987 68.1656050955414 157 22 100 0 1 157 528 372 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10702 169 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
13118211 13118211 PRJNA168635_P_NODE_19071_length_185_cov_4.514706_g18655_i0 PRJNA168635 19071 185 4.514706 8.3522061 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 279 6.66e-71   NTclustered gi|300078503|gb|GU001165.1| 238746 g18655 i0 94.054 4.40540540540541 185 10 99 1 1 184 1296 1112 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 815 279 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
13118319 13118319 PRJNA168635_P_NODE_24391_length_170_cov_4.752066_g23975_i0 PRJNA168635 24391 170 4.752066 8.0785122 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 167 4.87e-37   NTclustered gi|300078503|gb|GU001165.1| 238746 g23975 i0 84.571 76.4470588235294 175 20 99 5 2 170 989 1162 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12996 167 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
13118484 13118484 PRJNA168635_P_NODE_4251_length_408_cov_10.671309_g3849_i0 PRJNA168635 4251 408 10.671309 43.53894072 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 313 1.63e-80   NTclustered gi|300078503|gb|GU001165.1| 238746 g3849 i0 83.333 53.625 354 38 86 12 1 349 4095 4432 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21879 313 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
14393375 14393375 PRJNA168635_P_NODE_10192_length_259_cov_6.200000_g9777_i0 PRJNA168635 10192 259 6.2 16.058 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 169 2.24e-37   NTclustered gi|300078503|gb|GU001165.1| 238746 g9777 i0 79.848 40.019305019305 263 28 92 9 22 259 3041 3303 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10365 169 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
14393474 14393474 PRJNA168635_P_NODE_15172_length_206_cov_3.522293_g14756_i0 PRJNA168635 15172 206 3.522293 7.25592358 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 364 2.0399999999999993e-96   NTclustered gi|300078503|gb|GU001165.1| 238746 g14756 i0 98.551 92.2961165048544 207 2 100 1 1 206 1247 1041 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19013 364 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
15667543 15667543 PRJNA168635_P_NODE_4733_length_387_cov_14.420118_g4329_i0 PRJNA168635 4733 387 14.420118 55.80585666 uncultured Micronuclearia 1595896 Root_unresolved Root_unresolved 676 0   NTclustered gi|1516250890|gb|MK177607.1| 1595896 g4329 i0 98.196 92.8940568475452 388 6 100 1 1 387 513 900 Uncultured Micronuclearia clone DDI50.fa small subunit ribosomal RNA gene, partial sequence blastn 35950 676 1 Eukaryota CRuMs       Rigifilida   Micronuclearia uncultured Micronuclearia
16941474 16941474 PRJNA168635_P_NODE_10514_length_254_cov_9.112195_g10099_i0 PRJNA168635 10514 254 9.112195 23.1449753 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 272 1.6299999999999998e-68   NTclustered gi|300078503|gb|GU001165.1| 238746 g10099 i0 86.275 44.6732283464567 255 29 99 5 1 252 2370 2621 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11347 272 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
20766258 20766258 PRJNA168635_P_NODE_5237_length_369_cov_4.981250_g4833_i0 PRJNA168635 5237 369 4.98125 18.3808125 Diphylleia rotans 190327 Root_unresolved Root_unresolved 287 8.83e-73   NTclustered gi|1200177731|gb|MF039365.1| 190327 g4833 i0 81.383 99.420054200542 376 49 100 17 1 369 4047 3686 Diphylleia rotans isolate D_NIES3764 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 36686 287 1 Eukaryota CRuMs         Collodictyonidae Diphylleia Diphylleia rotans
22041003 22041003 PRJNA168635_P_NODE_16738_length_195_cov_4.787671_g16322_i0 PRJNA168635 16738 195 4.787671 9.33595845 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 182 2.06e-41   NTclustered gi|300078503|gb|GU001165.1| 238746 g16322 i0 95.575 187.097435897436 113 5 99 0 1 113 3542 3654 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 36484 182 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;