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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 13 ✖

bioproject 1

  • PRJNA168635 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
364645 364645 PRJNA168635_P_NODE_4561_length_394_cov_10.133333_g4157_i0 PRJNA168635 4561 394 10.133333 39.92533202 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 145 6.05e-30   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g4157 i0 88.889 29.7817258883249 117 13 30 0 68 184 5178 5294 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11734 145 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
1639194 1639194 PRJNA168635_P_NODE_1662_length_621_cov_3.361888_g1308_i0 PRJNA168635 1662 621 3.361888 20.87732448 Thecamonas trahens 529818 Root_unresolved Root_unresolved 174 1.26e-38   NTclustered gi|761380055|ref|NC_026452.1| 529818 g1308 i0 77.188 20.7342995169082 320 60 51 12 308 621 1493 1805 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 12876 174 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
11843126 11843126 PRJNA168635_P_NODE_24090_length_171_cov_2.204918_g23674_i0 PRJNA168635 24090 171 2.204918 3.77040978 Podomonas capensis 2925399 Root_unresolved Root_unresolved 111 2.33e-20   NTclustered gi|2206682168|gb|OM966641.1| 2925399 g23674 i0 86.869 0.578947368421053 99 13 58 0 2 100 5978 5880 Podomonas capensis strain SPRINTER small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 99 111 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Podomonas Podomonas capensis
11843212 11843212 PRJNA168635_P_NODE_31370_length_162_cov_6.442478_g30954_i0 PRJNA168635 31370 162 6.442478 10.43681436 Podomonas capensis 2925399 Root_unresolved Root_unresolved 250 4.45e-62   NTclustered gi|2206682168|gb|OM966641.1| 2925399 g30954 i0 94.444 75.6543209876543 162 9 100 0 1 162 2000 2161 Podomonas capensis strain SPRINTER small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12256 250 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Podomonas Podomonas capensis
13118470 13118470 PRJNA168635_P_NODE_3731_length_433_cov_11.421875_g3331_i0 PRJNA168635 3731 433 11.421875 49.45671875 Podomonas magna 2925398 Root_unresolved Root_unresolved 263 1.77e-65   NTclustered gi|2206682163|gb|OM966636.1| 2925398 g3331 i0 80.857 51.3233256351039 350 54 80 12 88 432 3399 3740 Podomonas magna strain CCAP19014 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22223 263 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Podomonas Podomonas magna
15667099 15667099 PRJNA168635_P_NODE_11533_length_241_cov_2.625000_g11117_i0 PRJNA168635 11533 241 2.625 6.32625 Singekia franciliensis 2925418 Root_unresolved Root_unresolved 351 1.91e-92   NTclustered gi|2206682165|gb|OM966638.1| 2925418 g11117 i0 92.975 72.7676348547718 242 15 100 2 1 241 4319 4559 Singekia franciliensis strain ORSAYFEB19APU1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17537 351 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia franciliensis
16356807 16356807 PRJNA168635_P_NODE_9453_length_271_cov_6.171171_g9038_i0 PRJNA168635 9453 271 6.171171 16.72387341 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 128 4.01e-25   NTclustered gi|2206682162|gb|OM966635.1| 1314681 g9038 i0 79.487 32.9077490774908 195 28 70 9 1 190 2447 2634 Mylnikovia oxoniensis strain CCAP19012 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8918 128 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Mylnikovia Mylnikovia oxoniensis
16941757 16941757 PRJNA168635_P_NODE_25094_length_169_cov_1.650000_g24678_i0 PRJNA168635 25094 169 1.65 2.7885 Singekia franciliensis 2925418 Root_unresolved Root_unresolved 267 4.63e-67   NTclustered gi|2206682165|gb|OM966638.1| 2925418 g24678 i0 95.238 55.0355029585799 168 8 99 0 2 169 5080 5247 Singekia franciliensis strain ORSAYFEB19APU1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9301 267 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia franciliensis
19490264 19490264 PRJNA168635_P_NODE_13336_length_222_cov_1.705202_g12920_i0 PRJNA168635 13336 222 1.705202 3.78554844 Singekia franciliensis 2925418 Root_unresolved Root_unresolved 296 8.24e-76   NTclustered gi|2206682165|gb|OM966638.1| 2925418 g12920 i0 91.628 0.968468468468468 215 16 96 2 2 215 6864 6651 Singekia franciliensis strain ORSAYFEB19APU1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 215 296 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia franciliensis
19490361 19490361 PRJNA168635_P_NODE_18216_length_188_cov_9.769784_g17800_i0 PRJNA168635 18216 188 9.769784 18.36719392 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 108 3.39e-19   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g17800 i0 92.208 29.6702127659574 77 5 41 1 112 188 6798 6873 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5578 108 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
20765826 20765826 PRJNA168635_P_NODE_11617_length_240_cov_2.769634_g11201_i0 PRJNA168635 11617 240 2.769634 6.6471216 Podomonas capensis 2925399 Root_unresolved Root_unresolved 73.1 1.66e-8   NTclustered gi|2206682168|gb|OM966641.1| 2925399 g11201 i0 82.353 0.354166666666667 85 13 35 1 137 221 5878 5960 Podomonas capensis strain SPRINTER small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 85 73.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Podomonas Podomonas capensis
20765903 20765903 PRJNA168635_P_NODE_15197_length_206_cov_2.343949_g14781_i0 PRJNA168635 15197 206 2.343949 4.82853494 Singekia franciliensis 2925418 Root_unresolved Root_unresolved 250 5.9499999999999995e-62   NTclustered gi|2206682165|gb|OM966638.1| 2925418 g14781 i0 88.835 41.0873786407767 206 19 99 4 3 206 5369 5166 Singekia franciliensis strain ORSAYFEB19APU1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8464 250 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia franciliensis
22041036 22041036 PRJNA168635_P_NODE_18558_length_187_cov_2.840580_g18142_i0 PRJNA168635 18558 187 2.84058 5.3118846 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 219 1.4899999999999999e-52   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g18142 i0 97.638 69.7647058823529 127 3 68 0 23 149 5304 5178 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13046 219 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;