RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1264536" and tax_superkingdom = "Viruses"

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tax_kingdom 3

tax_superkingdom 1

  • Viruses · 9 ✖

bioproject 1

  • PRJNA1264536 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
363900 363900 PRJNA1264536_P_NODE_5021_length_247_cov_0.896552_g4947_i0 PRJNA1264536 5021 247 0.896552 2.21448344 Zebrafish picornavirus 1 2304617 Viruses Viruses 433 6.82e-117   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g4947 i0 98.374 2.98785425101215 246 4 99 0 2 247 6003 5758 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 738 433 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
1638695 1638695 PRJNA1264536_P_NODE_1462_length_477_cov_2.438119_g1388_i0 PRJNA1264536 1462 477 2.438119 11.62982763 Fibrovirus fs1 70203 Viruses Viruses 876 0   NTclustered gi|238821372|ref|NC_012757.1| 642111 g1388 i0 99.79 12.0314465408805 477 1 100 0 1 477 1449 1925 Vibrio phage VEJphi, complete genome blastn 5739 876 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Fibrovirus Fibrovirus fs1
1638767 1638767 PRJNA1264536_P_NODE_4482_length_252_cov_0.871508_g4408_i0 PRJNA1264536 4482 252 0.871508 2.19620016 brine shrimp yue-like virus 3 2900455 Viruses Viruses 453 5.36e-123   NTclustered gi|2209094277|gb|OL472813.1| 2900455 g4408 i0 99.203 0.996031746031746 251 2 99 0 1 251 120 370 MAG: Brine shrimp yue-like virus 3 isolate 01/QH/92-02 segment 2 hypothetical protein gene, complete cds blastn 251 453 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 3
13117730 13117730 PRJNA1264536_P_NODE_3911_length_274_cov_1.034826_g3837_i0 PRJNA1264536 3911 274 1.034826 2.83542324 brine shrimp yue-like virus 3 2900455 Viruses Viruses 496 9.67e-136   NTclustered gi|2209095234|gb|OL472819.1| 2900455 g3837 i0 99.27 10.9233576642336 274 2 100 0 1 274 193 466 MAG: Brine shrimp yue-like virus 3 isolate SH/98 segment 2 hypothetical protein gene, complete cds blastn 2993 496 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 3
15666807 15666807 PRJNA1264536_P_NODE_4853_length_248_cov_0.891429_g4779_i0 PRJNA1264536 4853 248 0.891429 2.21074392 Bacteriophage sp. 38018 Viruses Viruses 453 5.2600000000000005e-123   NTclustered gi|2059728274|tpg|BK024922.1| 38018 g4779 i0 99.597 4.41129032258065 248 1 100 0 1 248 18820 18573 MAG TPA_asm: Bacteriophage sp. isolate ctxqM11, partial genome blastn 1094 453 1 Viruses               Bacteriophage sp.
18215641 18215641 PRJNA1264536_P_NODE_4215_length_258_cov_1.264865_g4141_i0 PRJNA1264536 4215 258 1.264865 3.2633517 Zebrafish picornavirus 1 2304617 Viruses Viruses 394 3.39e-105   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g4141 i0 94.186 2.86046511627907 258 15 100 0 1 258 5182 4925 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 738 394 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
19489942 19489942 PRJNA1264536_P_NODE_4376_length_253_cov_0.866667_g4302_i0 PRJNA1264536 4376 253 0.866667 2.19266751 Caudoviricetes sp. 2832643 Viruses Viruses 158 4.729999999999999e-34   NTclustered gi|1882569127|gb|MT773557.1| 2832643 g4302 i0 79.476 1.0197628458498 229 42 90 5 25 251 864 1089 MAG: Myoviridae sp. isolate BML_S_1, partial genome blastn 258 158 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
23316036 23316036 PRJNA1264536_P_NODE_2239_length_378_cov_0.973770_g2165_i0 PRJNA1264536 2239 378 0.97377 3.6808506 Zebrafish picornavirus 1 2304617 Viruses Viruses 649 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g2165 i0 98.118 2.97354497354497 372 7 98 0 5 376 7639 8010 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1124 649 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
23316062 23316062 PRJNA1264536_P_NODE_3739_length_282_cov_1.301435_g3665_i0 PRJNA1264536 3739 282 1.301435 3.6700467 Caudoviricetes sp. 2832643 Viruses Viruses 521 1.6499999999999996e-143   NTclustered gi|2054489670|tpg|BK032128.1| 2832643 g3665 i0 100 2.99290780141844 282 0 100 0 1 282 29822 30103 MAG TPA_asm: Caudoviricetes sp. isolate ct1Sq5, partial genome blastn 844 521 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;