RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1264536" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1264536 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8017257 8017257 PRJNA1264536_P_NODE_3007_length_323_cov_1.248000_g2933_i0 PRJNA1264536 3007 323 1.248 4.03104 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 592 1.4499999999999999e-164   NTclustered gi|681870004|gb|KM001687.1| 1542451 g2933 i0 99.69 46.0650154798762 323 1 100 0 1 323 756 1078 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 14879 592 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
9292060 9292060 PRJNA1264536_P_NODE_4068_length_266_cov_1.611399_g3994_i0 PRJNA1264536 4068 266 1.611399 4.28632134 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 492 1.2099999999999999e-134   NTclustered gi|681870005|gb|KM001688.1| 1542451 g3994 i0 100 56.6992481203008 266 0 100 0 1 266 1870 2135 Myxidium streisingeri clone ZF10 18S small subunit ribosomal RNA gene, partial sequence blastn 15082 492 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
18215589 18215589 PRJNA1264536_P_NODE_1415_length_485_cov_1.055825_g1341_i0 PRJNA1264536 1415 485 1.055825 5.12075125 Unicauda fimbrethilae 1720082 Cnidaria other_Eukaryota 63.9 2.18e-5   NTclustered gi|2089706636|gb|OK030695.1| 1720082 g1341 i0 97.297 4.1360824742268 37 1 8 0 1 37 1974 1938 Unicauda fimbrethilae large subunit ribosomal RNA gene, partial sequence blastn 2006 63.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Unicauda Unicauda fimbrethilae
20765474 20765474 PRJNA1264536_P_NODE_3997_length_269_cov_1.515306_g3923_i0 PRJNA1264536 3997 269 1.515306 4.07617314 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 488 1.5799999999999998e-133   NTclustered gi|681870004|gb|KM001687.1| 1542451 g3923 i0 99.625 44.7174721189591 267 1 99 0 3 269 6 272 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 12029 488 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;