RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1264536" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1264536 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8017270 8017270 PRJNA1264536_P_NODE_3647_length_288_cov_1.083721_g3573_i0 PRJNA1264536 3647 288 1.083721 3.12111648 Daldinia caldariorum 326644 Fungi Fungi 52.8 0.027   NTclustered gi|2234654077|ref|XM_047932825.1| 326644 g3573 i0 96.875 0.111111111111111 32 0 11 1 153 184 842 812 Daldinia caldariorum uncharacterized protein (F4812DRAFT_413826), mRNA blastn 32 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Hypoxylaceae Daldinia Daldinia caldariorum
10567955 10567955 PRJNA1264536_P_NODE_1689_length_441_cov_1.573370_g1615_i0 PRJNA1264536 1689 441 1.57337 6.9385617 Debaryomyces fabryi 58627 Fungi Fungi 302 3.83e-77   NTclustered gi|998531938|ref|XM_015610877.1| 58627 g1615 i0 81.217 30.5374149659864 378 67 85 2 49 424 37 412 Debaryomyces fabryi 40S ribosomal protein S14-A (AC631_02047), partial mRNA blastn 13467 302 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Debaryomyces Debaryomyces fabryi
15666799 15666799 PRJNA1264536_P_NODE_4233_length_257_cov_1.271739_g4159_i0 PRJNA1264536 4233 257 1.271739 3.26836923 Plenodomus biglobosus 220672 Fungi Fungi 52.8 0.023   NTclustered gi|702066537|emb|FO905617.1| 225338 g4159 i0 100 0.108949416342412 28 0 11 0 179 206 69748 69775 Leptosphaeria biglobosa brassicae b35_scaffold00047 complete sequence blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Leptosphaeriaceae Plenodomus Plenodomus biglobosus
15666804 15666804 PRJNA1264536_P_NODE_4633_length_250_cov_1.322034_g4559_i0 PRJNA1264536 4633 250 1.322034 3.305085 Helenozyma melibiosica 5491 Fungi Fungi 305 1.57e-78   NTclustered gi|32127488|emb|AJ508531.1| 5491 g4559 i0 90.213 93.008 235 21 94 2 1 234 73 306 Candida melibiosica partial act1 gene for actin, strain CBS 6087T blastn 23252 305 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Metschnikowiaceae Helenozyma Helenozyma melibiosica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;