RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1263632" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1263632 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1638517 1638517 PRJNA1263632_P_NODE_3782_length_319_cov_0.939024_g3764_i0 PRJNA1263632 3782 319 0.939024 2.99548656 Phycomyces blakesleeanus 4837 Fungi Fungi 200 1.0099999999999999e-46   NTclustered gi|1069947120|ref|XM_018433359.1| 763407 g3764 i0 83.721 65.6332288401254 215 31 67 2 97 311 108 318 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 20937 200 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
5467029 5467029 PRJNA1263632_P_NODE_3885_length_315_cov_0.950413_g3867_i0 PRJNA1263632 3885 315 0.950413 2.99380095 Phycomyces blakesleeanus 4837 Fungi Fungi 195 4.63e-45   NTclustered gi|1069938230|ref|XM_018429293.1| 763407 g3867 i0 80.228 34.0666666666667 263 48 83 4 7 267 3331 3071 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 10731 195 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;