RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1263632" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1263632 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8017154 8017154 PRJNA1263632_P_NODE_6547_length_250_cov_1.564972_g6529_i0 PRJNA1263632 6547 250 1.564972 3.91243 Paratrypanosoma confusum 1470209 Euglenozoa other_Eukaryota 189 1.6499999999999999e-43   NTclustered gi|452769044|gb|KC534710.1| 1470209 g6529 i0 88.05 4.16 159 19 64 0 1 159 1018 1176 Trypanosomatidae sp. TS-2013 clone C3829L4899o3 hypothetical protein gene, partial cds blastn 1040 189 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Paratrypanosoma Paratrypanosoma confusum
11842291 11842291 PRJNA1263632_P_NODE_1670_length_464_cov_1.685422_g1652_i0 PRJNA1263632 1670 464 1.685422 7.82035808 Neobodo designis 312471 Euglenozoa other_Eukaryota 767 0   NTclustered gi|59891960|gb|AY753620.1| 312471 g1652 i0 96.552 96.3318965517241 464 15 100 1 1 464 2084 1622 Neobodo designis isolate TeToto3 18S ribosomal RNA gene, partial sequence blastn 44698 767 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
12532658 12532658 PRJNA1263632_P_NODE_5450_length_271_cov_1.272727_g5432_i0 PRJNA1263632 5450 271 1.272727 3.44909017 Leishmania 5658 Euglenozoa other_Eukaryota 268 2.2699999999999994e-67   NTclustered gi|2593250474|emb|OY748421.1| 5660 g5432 i0 95.294 86.3284132841328 170 6 62 2 1 169 991044 990876 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 23395 268 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
21455854 21455854 PRJNA1263632_P_NODE_6437_length_251_cov_0.865169_g6419_i0 PRJNA1263632 6437 251 0.865169 2.17157419 Kinetoplastea 5653 Euglenozoa other_Eukaryota 464 2.47e-126   NTclustered gi|59891965|gb|AY753625.1| 313291 g6419 i0 100 82.7649402390438 251 0 100 0 1 251 727 977 Bodonidae sp. Pan2 18S ribosomal RNA gene, partial sequence blastn 20774 464 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   Bodonidae sp. Pan2
24589937 24589937 PRJNA1263632_P_NODE_1720_length_458_cov_1.703896_g1702_i0 PRJNA1263632 1720 458 1.703896 7.80384368 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 390 8.289999999999999e-104   NTclustered gi|1002446285|ref|XM_015803935.1| 157538 g1702 i0 85.714 32.7161572052402 371 52 81 1 75 444 426 56 Leptomonas pyrrhocoris putative 40S ribosomal protein S8 mRNA blastn 14984 390 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
25280111 25280111 PRJNA1263632_P_NODE_7780_length_244_cov_0.900585_g7762_i0 PRJNA1263632 7780 244 0.900585 2.1974274 Trypanosoma 5690 Euglenozoa other_Eukaryota 206 1.6e-48   NTclustered gi|71666481|ref|XM_815106.1| 5693 g7762 i0 82.553 6.45081967213115 235 39 96 2 5 238 7 240 Trypanosoma cruzi 40S ribosomal protein S5, putative (Tc00.1047053506297.150), partial mRNA blastn 1574 206 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;