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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA1263632" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA1263632 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
363739 363739 PRJNA1263632_P_NODE_6301_length_252_cov_2.027933_g6283_i0 PRJNA1263632 6301 252 2.027933 5.11039116 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 455 1.49e-123   NTclustered gi|512134943|gb|JX178902.1| 1295638 g6283 i0 99.206 96.8492063492064 252 2 100 0 1 252 1454 1203 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24406 455 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
1638495 1638495 PRJNA1263632_P_NODE_2882_length_360_cov_1.397213_g2864_i0 PRJNA1263632 2882 360 1.397213 5.0299668 Loxophyllum shini 1346494 SAR_Eukaryotes SAR_Eukaryotes 571 2.1199999999999995e-158   NTclustered gi|375305428|gb|JF975388.1| 1346494 g2864 i0 95.278 100.086111111111 360 17 100 0 1 360 1386 1027 Loxophyllum shini isolate PHB2007053101 28S ribosomal RNA gene, partial sequence blastn 36031 571 1 Eukaryota Sar   Ciliophora Litostomatea Pleurostomatida Litonotidae Loxophyllum Loxophyllum shini
2914484 2914484 PRJNA1263632_P_NODE_6923_length_248_cov_1.748571_g6905_i0 PRJNA1263632 6923 248 1.748571 4.33645608 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 451 1.89e-122   NTclustered gi|10782|emb|X54004.1| 5908 g6905 i0 99.595 52.5483870967742 247 1 99 0 1 247 3012 3258 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 13032 451 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
4882022 4882022 PRJNA1263632_P_NODE_3864_length_315_cov_2.826446_g3846_i0 PRJNA1263632 3864 315 2.826446 8.9033049 Ophryoscolecidae 47890 SAR_Eukaryotes SAR_Eukaryotes 359 1.55e-94   NTclustered gi|860929|emb|Z49849.1| 40636 g3846 i0 87.662 24.5333333333333 308 38 98 0 1 308 122 429 Entodinium sp. gene for alpha-tubulin (partial) blastn 7728 359 1 Eukaryota Sar   Ciliophora Litostomatea Entodiniomorphida Ophryoscolecidae Entodinium Entodinium sp.
5467098 5467098 PRJNA1263632_P_NODE_6305_length_252_cov_1.720670_g6287_i0 PRJNA1263632 6305 252 1.72067 4.3360884 Vorticella sp. 1 2979179 SAR_Eukaryotes SAR_Eukaryotes 466 6.89e-127   NTclustered gi|2304601489|gb|OP458310.1| 2979179 g6287 i0 100 94.6468253968254 252 0 100 0 1 252 1461 1712 Vorticella sp. 1 large subunit ribosomal RNA gene, partial sequence blastn 23851 466 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 1
5467165 5467165 PRJNA1263632_P_NODE_8485_length_241_cov_0.880952_g8467_i0 PRJNA1263632 8485 241 0.880952 2.12309432 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 396 8.7e-106   NTclustered gi|347439301|gb|JN111999.1| 151077 g8467 i0 96.266 12.8423236514523 241 9 100 0 1 241 409 169 Chilodonella uncinata strain USA_WH actin gene, partial cds; macronuclear blastn 3095 396 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
8706790 8706790 PRJNA1263632_P_NODE_2487_length_384_cov_2.347267_g2469_i0 PRJNA1263632 2487 384 2.347267 9.01350528 Sessilida 1974272 SAR_Eukaryotes SAR_Eukaryotes 704 0   NTclustered gi|363412153|gb|JN120227.1| 60850 g2469 i0 99.74 100.005208333333 384 1 100 0 1 384 947 564 Vorticella convallaria isolate 96Vorsp16 18S ribosomal RNA gene, partial sequence blastn 38402 704 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella convallaria
9982101 9982101 PRJNA1263632_P_NODE_2688_length_372_cov_3.096990_g2670_i0 PRJNA1263632 2688 372 3.09699 11.5208028 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 616 9.999999999999999e-172   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2670 i0 96.505 89.2016129032258 372 13 100 0 1 372 10 381 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 33183 616 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
10567719 10567719 PRJNA1263632_P_NODE_1169_length_554_cov_1.130977_g1151_i0 PRJNA1263632 1169 554 1.130977 6.26561258 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 894 0   NTclustered gi|300676719|gb|GQ377693.1| 151077 g1151 i0 95.841 54.8808664259928 553 23 99 0 2 554 590 38 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 30404 894 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
11257321 11257321 PRJNA1263632_P_NODE_6309_length_252_cov_1.653631_g6291_i0 PRJNA1263632 6309 252 1.653631 4.16715012 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 449 6.94e-122   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g6291 i0 98.81 80.3174603174603 252 3 100 0 1 252 2401 2652 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 20240 449 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
15081627 15081627 PRJNA1263632_P_NODE_8332_length_241_cov_1.125000_g8314_i0 PRJNA1263632 8332 241 1.125 2.71125 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 174 4.4399999999999997e-39   NTclustered gi|10792|emb|X12768.1| 5908 g8314 i0 82.99 64.9875518672199 194 31 80 2 1 193 1265 1457 Tetrahymena pyriformis beta-tubulin gene 1 (beta-TT1) blastn 15662 174 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
15666712 15666712 PRJNA1263632_P_NODE_7993_length_243_cov_0.905882_g7975_i0 PRJNA1263632 7993 243 0.905882 2.20129326 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 165 2.6999999999999997e-36   NTclustered gi|584458848|gb|KJ159074.1| 5949 g7975 i0 79.915 87.2633744855967 234 39 95 8 14 243 1157 928 Stylonychia lemnae histone variant H3.1 (HIS31) gene, complete cds; macronuclear blastn 21205 165 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
18215442 18215442 PRJNA1263632_P_NODE_4275_length_301_cov_1.561404_g4257_i0 PRJNA1263632 4275 301 1.561404 4.69982604 Dasytricha ruminantium 40806 SAR_Eukaryotes SAR_Eukaryotes 374 5.2599999999999996e-99   NTclustered gi|92790149|emb|AJ965260.1| 40806 g4257 i0 89.037 128.083056478405 301 33 100 0 1 301 359 659 Dasytricha ruminantium partial mRNA for Polyubiqutin 4 (polyubiqutin 4 gene) blastn 38553 374 1 Eukaryota Sar   Ciliophora Litostomatea Vestibuliferida Isotrichidae Dasytricha Dasytricha ruminantium
22040286 22040286 PRJNA1263632_P_NODE_1098_length_570_cov_2.438632_g1080_i0 PRJNA1263632 1098 570 2.438632 13.9002024 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 931 0   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g1080 i0 96.14 80.4684210526316 570 22 100 0 1 570 1491 2060 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 45867 931 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
22040307 22040307 PRJNA1263632_P_NODE_1718_length_458_cov_1.797403_g1700_i0 PRJNA1263632 1718 458 1.797403 8.23210574 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 433 1.3599999999999999e-116   NTclustered gi|2386234047|ref|XM_001435408.2| 5888 g1700 i0 84.545 66.2117903930131 440 64 96 4 21 458 629 192 Paramecium tetraurelia uncharacterized protein (GSPATT00036831001), mRNA blastn 30325 433 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
22730836 22730836 PRJNA1263632_P_NODE_2758_length_368_cov_2.542373_g2740_i0 PRJNA1263632 2758 368 2.542373 9.35593264 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 339 2.3999999999999997e-88   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2740 i0 97.949 59.0570652173913 195 4 53 0 1 195 2888 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 21733 339 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;