RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1263632" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1263632 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10567728 10567728 PRJNA1263632_P_NODE_1449_length_496_cov_1.366430_g1431_i0 PRJNA1263632 1449 496 1.36643 6.7774928 Cryptococcus depauperatus 5208 Fungi Fungi 60.2 2.89e-4   NTclustered gi|2753010347|ref|XM_066215550.1| 1295531 g1431 i0 100 0.0645161290322581 32 0 6 0 97 128 179 148 Cryptococcus depauperatus CBS 7841 uncharacterized protein (L203_106192), partial mRNA blastn 32 60.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus depauperatus
20180091 20180091 PRJNA1263632_P_NODE_4196_length_303_cov_2.873913_g4178_i0 PRJNA1263632 4196 303 2.873913 8.70795639 Opisthokonta 33154 Fungi Fungi 58.4 6.07e-4   NTclustered gi|2491074381|gb|CP122417.1| 5207 g4178 i0 90.698 1.5016501650165 43 4 14 0 100 142 737519 737561 Cryptococcus neoformans isolate Bt63 blastn 455 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus neoformans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;