RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1263632" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1263632 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6741435 6741435 PRJNA1263632_P_NODE_2966_length_355_cov_1.581560_g2948_i0 PRJNA1263632 2966 355 1.58156 5.614538 Saccharomyces paradoxus 27291 Fungi Fungi 191 6.82e-44   NTclustered gi|2087953814|gb|CP081976.1| 27291 g2948 i0 81.048 50.0676056338028 248 39 69 8 1 244 58341 58098 Mutant Saccharomyces paradoxus strain 337 chromosome X genomic sequence blastn 17774 191 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces paradoxus
9291914 9291914 PRJNA1263632_P_NODE_6128_length_255_cov_4.043956_g6110_i0 PRJNA1263632 6128 255 4.043956 10.3120878 Candida jiufengensis 497108 Fungi Fungi 213 1e-50   NTclustered gi|2325096801|ref|XM_051763683.1| 497108 g6110 i0 82.917 80.8039215686274 240 38 93 3 6 243 143 381 Candida jiufengensis translation elongation factor EF-1 alpha (KGF54_003128), partial mRNA blastn 20605 213 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida jiufengensis
23315969 23315969 PRJNA1263632_P_NODE_8059_length_243_cov_0.905882_g8041_i0 PRJNA1263632 8059 243 0.905882 2.20129326 Cladosporium halotolerans 1052096 Fungi Fungi 78.7 3.61e-10   NTclustered gi|2837739333|ref|XM_069371983.1| 1052096 g8041 i0 94.118 15.8847736625514 51 3 21 0 193 243 379 429 Cladosporium halotolerans Ras-related protein Rab-6B (Rab6b), mRNA blastn 3860 78.7 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
25280103 25280103 PRJNA1263632_P_NODE_2980_length_354_cov_3.572954_g2962_i0 PRJNA1263632 2980 354 3.572954 12.64825716 Debaryomycetaceae 766764 Fungi Fungi 235 3.1e-57   NTclustered gi|68484887|ref|XM_708572.1| 237561 g2962 i0 81.754 79.593220338983 285 48 80 4 1 283 352 70 Candida albicans SC5314 Hht21p (HHT21), partial mRNA blastn 28176 237 0.991561181434599 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida albicans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;