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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1263632" and tax_kingdom = "Fungi"

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tax_superkingdom 1

tax_kingdom 1

  • Fungi · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA1263632 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1638517 1638517 PRJNA1263632_P_NODE_3782_length_319_cov_0.939024_g3764_i0 PRJNA1263632 3782 319 0.939024 2.99548656 Phycomyces blakesleeanus 4837 Fungi Fungi 200 1.0099999999999999e-46   NTclustered gi|1069947120|ref|XM_018433359.1| 763407 g3764 i0 83.721 65.6332288401254 215 31 67 2 97 311 108 318 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 20937 200 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
5467029 5467029 PRJNA1263632_P_NODE_3885_length_315_cov_0.950413_g3867_i0 PRJNA1263632 3885 315 0.950413 2.99380095 Phycomyces blakesleeanus 4837 Fungi Fungi 195 4.63e-45   NTclustered gi|1069938230|ref|XM_018429293.1| 763407 g3867 i0 80.228 34.0666666666667 263 48 83 4 7 267 3331 3071 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 10731 195 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
6741435 6741435 PRJNA1263632_P_NODE_2966_length_355_cov_1.581560_g2948_i0 PRJNA1263632 2966 355 1.58156 5.614538 Saccharomyces paradoxus 27291 Fungi Fungi 191 6.82e-44   NTclustered gi|2087953814|gb|CP081976.1| 27291 g2948 i0 81.048 50.0676056338028 248 39 69 8 1 244 58341 58098 Mutant Saccharomyces paradoxus strain 337 chromosome X genomic sequence blastn 17774 191 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces paradoxus
9291758 9291758 PRJNA1263632_P_NODE_1188_length_550_cov_2.350105_g1170_i0 PRJNA1263632 1188 550 2.350105 12.9255775 uncultured fungus 175245 Fungi Fungi 475 2.7099999999999994e-129   NTclustered gi|2159202804|emb|OU941232.1| 175245 g1170 i0 82.554 44.44 556 82 99 15 1 549 762 1309 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus02526 blastn 24442 475 1 Eukaryota Opisthokonta Fungi           uncultured fungus
9291914 9291914 PRJNA1263632_P_NODE_6128_length_255_cov_4.043956_g6110_i0 PRJNA1263632 6128 255 4.043956 10.3120878 Candida jiufengensis 497108 Fungi Fungi 213 1e-50   NTclustered gi|2325096801|ref|XM_051763683.1| 497108 g6110 i0 82.917 80.8039215686274 240 38 93 3 6 243 143 381 Candida jiufengensis translation elongation factor EF-1 alpha (KGF54_003128), partial mRNA blastn 20605 213 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida jiufengensis
10567728 10567728 PRJNA1263632_P_NODE_1449_length_496_cov_1.366430_g1431_i0 PRJNA1263632 1449 496 1.36643 6.7774928 Cryptococcus depauperatus 5208 Fungi Fungi 60.2 2.89e-4   NTclustered gi|2753010347|ref|XM_066215550.1| 1295531 g1431 i0 100 0.0645161290322581 32 0 6 0 97 128 179 148 Cryptococcus depauperatus CBS 7841 uncharacterized protein (L203_106192), partial mRNA blastn 32 60.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus depauperatus
11842296 11842296 PRJNA1263632_P_NODE_1870_length_442_cov_1.791328_g1852_i0 PRJNA1263632 1870 442 1.791328 7.91766976 uncultured fungus 175245 Fungi Fungi 710 0   NTclustered gi|583834395|gb|KF567961.1| 175245 g1852 i0 95.74 133.79185520362 446 10 99 7 2 442 108 549 Uncultured soil fungus clone NCD_LSU_otu2991 28S ribosomal RNA gene, partial sequence blastn 59136 710 1 Eukaryota Opisthokonta Fungi           uncultured fungus
20180091 20180091 PRJNA1263632_P_NODE_4196_length_303_cov_2.873913_g4178_i0 PRJNA1263632 4196 303 2.873913 8.70795639 Opisthokonta 33154 Fungi Fungi 58.4 6.07e-4   NTclustered gi|2491074381|gb|CP122417.1| 5207 g4178 i0 90.698 1.5016501650165 43 4 14 0 100 142 737519 737561 Cryptococcus neoformans isolate Bt63 blastn 455 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus neoformans
23315969 23315969 PRJNA1263632_P_NODE_8059_length_243_cov_0.905882_g8041_i0 PRJNA1263632 8059 243 0.905882 2.20129326 Cladosporium halotolerans 1052096 Fungi Fungi 78.7 3.61e-10   NTclustered gi|2837739333|ref|XM_069371983.1| 1052096 g8041 i0 94.118 15.8847736625514 51 3 21 0 193 243 379 429 Cladosporium halotolerans Ras-related protein Rab-6B (Rab6b), mRNA blastn 3860 78.7 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
24590087 24590087 PRJNA1263632_P_NODE_7200_length_247_cov_0.885057_g7182_i0 PRJNA1263632 7200 247 0.885057 2.18609079 Olpidium brassicae 70189 Fungi Fungi 152 2.1399999999999998e-32   NTclustered gi|358030887|dbj|AB609177.1| 70189 g7182 i0 79.73 63.2591093117409 222 35 89 6 11 230 1235 1448 Olpidium brassicae EF2 mRNA for translation elongation factor 2, partial cds, specimen_voucher: UBC:UBC F19784, clone: 2 blastn 15625 152 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium brassicae
25280103 25280103 PRJNA1263632_P_NODE_2980_length_354_cov_3.572954_g2962_i0 PRJNA1263632 2980 354 3.572954 12.64825716 Debaryomycetaceae 766764 Fungi Fungi 235 3.1e-57   NTclustered gi|68484887|ref|XM_708572.1| 237561 g2962 i0 81.754 79.593220338983 285 48 80 4 1 283 352 70 Candida albicans SC5314 Hht21p (HHT21), partial mRNA blastn 28176 237 0.991561181434599 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida albicans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;