RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1262902" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1262902 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
363482 363482 PRJNA1262902_P_NODE_11701_length_242_cov_0.911243_g11659_i0 PRJNA1262902 11701 242 0.911243 2.20520806 Pithovirus LCDPAC02 2506601 Viruses Viruses 52.8 0.022   NTclustered gi|1588058210|gb|MK500300.1| 2506601 g11659 i0 94.286 0.144628099173554 35 1 14 1 13 47 67448 67415 MAG: Pithovirus LCDPAC02 genomic sequence blastn 35 52.8 1 Viruses Pithoviruses             Pithovirus LCDPAC02
6741292 6741292 PRJNA1262902_P_NODE_12126_length_241_cov_0.916667_g12084_i0 PRJNA1262902 12126 241 0.916667 2.20916747 Caudoviricetes sp. 2832643 Viruses Viruses 440 3.959999999999999e-119   NTclustered gi|2914972312|gb|OR222040.1| 2832643 g12084 i0 99.585 34.9294605809129 241 1 100 0 1 241 124291 124531 MAG: Caudoviricetes sp. isolate MSP0074 genomic sequence blastn 8418 440 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10567637 10567637 PRJNA1262902_P_NODE_3349_length_309_cov_0.995763_g3307_i0 PRJNA1262902 3349 309 0.995763 3.07690767 Metapenaeus joyneri majanivirus 2984280 Viruses Viruses 52.8 0.029   NTclustered gi|2327925658|dbj|LC738878.1| 2984280 g3307 i0 100 0.0906148867313916 28 0 9 0 114 141 190831 190804 MAG: Metapenaeus joyneri majanivirus Tokushima2020 DNA, complete genome blastn 28 52.8 1 Viruses       Naldaviricetes   Nimaviridae   Metapenaeus joyneri majanivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;