RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1255065" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1255065 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5464054 5464054 PRJNA1255065_P_NODE_99665_length_174_cov_1.864000_g97437_i0 PRJNA1255065 99665 174 1.864 3.24336 Zebrafish picornavirus 1 2304617 Viruses Viruses 289 1.02e-73   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g97437 i0 97.076 2.51724137931034 171 5 98 0 4 174 8 178 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 438 289 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
9288657 9288657 PRJNA1255065_P_NODE_61708_length_241_cov_1.661458_g59480_i0 PRJNA1255065 61708 241 1.661458 4.00411378 Zebrafish picornavirus 1 2304617 Viruses Viruses 440 3.959999999999999e-119   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g59480 i0 99.585 3 241 1 100 0 1 241 4456 4696 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 723 440 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
10564820 10564820 PRJNA1255065_P_NODE_94929_length_180_cov_1.190840_g92701_i0 PRJNA1255065 94929 180 1.19084 2.143512 Zebrafish picornavirus 1 2304617 Viruses Viruses 272 1.08e-68   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g92701 i0 93.889 3 180 11 100 0 1 180 1472 1651 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 540 272 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
16936990 16936990 PRJNA1255065_P_NODE_100894_length_173_cov_1.419355_g98666_i0 PRJNA1255065 100894 173 1.419355 2.45548415 Zebrafish picornavirus 1 2304617 Viruses Viruses 270 3.69e-68   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g98666 i0 94.798 3 173 9 100 0 1 173 2335 2163 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 519 270 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
16938006 16938006 PRJNA1255065_P_NODE_95214_length_179_cov_2.307692_g92986_i0 PRJNA1255065 95214 179 2.307692 4.13076868 Zebrafish picornavirus 1 2304617 Viruses Viruses 276 8.27e-70   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g92986 i0 99.342 2.91620111731844 152 1 100 0 1 152 1148 1299 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 522 276 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
23312348 23312348 PRJNA1255065_P_NODE_143879_length_163_cov_0.912281_g141651_i0 PRJNA1255065 143879 163 0.912281 1.48701803 Zebrafish picornavirus 1 2304617 Viruses Viruses 283 4.43e-72   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g141651 i0 98.148 2.98159509202454 162 3 99 0 2 163 7454 7293 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 486 283 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;