RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1255065" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1255065 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9288069 9288069 PRJNA1255065_P_NODE_116368_length_167_cov_1.322034_g114140_i0 PRJNA1255065 116368 167 1.322034 2.20779678 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 303 3.5e-78   NTclustered gi|1173576277|gb|KY883384.1| 56466 g114140 i0 99.401 21.2574850299401 167 1 100 0 1 167 1329 1163 Peranema trichophorum isolate PT small subunit ribosomal RNA gene, partial sequence blastn 3550 303 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
15080582 15080582 PRJNA1255065_P_NODE_104332_length_169_cov_2.491667_g102104_i0 PRJNA1255065 104332 169 2.491667 4.21091723 Peranema 3287 Euglenozoa other_Eukaryota 307 2.73e-79   NTclustered gi|1803019098|gb|MT007870.1| 56466 g102104 i0 99.408 7.18934911242604 169 1 100 0 1 169 2025 1857 Peranema trichophorum strain PtR small subunit ribosomal RNA gene, partial sequence blastn 1215 307 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
18212193 18212193 PRJNA1255065_P_NODE_58015_length_254_cov_1.414634_g55787_i0 PRJNA1255065 58015 254 1.414634 3.59317036 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 459 1.1599999999999999e-124   NTclustered gi|27461806|gb|AY130826.1| 56466 g55787 i0 99.213 2.97637795275591 254 2 100 0 1 254 451 198 Peranema trichophorum voucher Carolina Biol. Supp. Co. (CBS) CE 13-1838 large subunit ribosomal RNA gene, partial sequence blastn 756 459 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;