contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA1255065" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 360204 | 360204 | PRJNA1255065_P_NODE_27301_length_496_cov_1.315436_g25104_i0 | PRJNA1255065 | 27301 | 496 | 1.315436 | 6.52456256 | Leptolinea sp. HRD-7 | 2830982 | Bacteria | Bacteria | 496 | 1.86e-135 | NTclustered | gi|2250018340|dbj|AP024710.1| | 2830982 | g25104 | i0 | 84.959 | 243.332661290323 | 492 | 71 | 99 | 3 | 5 | 496 | 1245426 | 1245914 | Leptolinea sp. HRD-7 DNA, complete genome | blastn | 120693 | 496 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineaceae | Leptolinea | Leptolinea sp. HRD-7 | ||
| 5463886 | 5463886 | PRJNA1255065_P_NODE_74265_length_211_cov_0.938272_g72037_i0 | PRJNA1255065 | 74265 | 211 | 0.938272 | 1.97975392 | Candidatus Chlorohelix allophototropha | 3003348 | Bacteria | Bacteria | 206 | 1.34e-48 | NTclustered | gi|2530750984|gb|CP128400.1| | 3003348 | g72037 | i0 | 90.385 | 653.748815165877 | 156 | 15 | 74 | 0 | 56 | 211 | 319916 | 319761 | Candidatus Chlorohelix allophototropha isolate L227-S17 chromosome 2, complete sequence | blastn | 137941 | 206 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Candidatus Chloroheliales | Candidatus Chloroheliaceae | Candidatus Chlorohelix | Candidatus Chlorohelix allophototropha | ||
| 11838722 | 11838722 | PRJNA1255065_P_NODE_142170_length_163_cov_0.912281_g139942_i0 | PRJNA1255065 | 142170 | 163 | 0.912281 | 1.48701803 | Tepidiforma flava | 3004094 | Bacteria | Bacteria | 291 | 2.64e-74 | NTclustered | gi|2421951025|gb|CP115149.1| | 3004094 | g139942 | i0 | 98.773 | 2.00613496932515 | 163 | 2 | 100 | 0 | 1 | 163 | 1721268 | 1721106 | Tepidiforma flava strain YIM 72310 chromosome, complete genome | blastn | 327 | 291 | 1 | Bacteria | Bacillati | Chloroflexota | Tepidiformia | Tepidiformales | Tepidiformaceae | Tepidiforma | Tepidiforma flava | ||
| 18212125 | 18212125 | PRJNA1255065_P_NODE_48435_length_298_cov_2.811245_g46209_i0 | PRJNA1255065 | 48435 | 298 | 2.811245 | 8.3775101 | Candidatus Roseilinea sp. | 2838777 | Bacteria | Bacteria | 213 | 1.2e-50 | NTclustered | gi|2314722916|dbj|AP024676.1| | 2838777 | g46209 | i0 | 82.031 | 65.7080536912752 | 256 | 41 | 86 | 5 | 2 | 256 | 3494978 | 3494727 | MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome | blastn | 19581 | 213 | 1 | Bacteria | Candidatus Thermofonsia Clade 3 | Bacillati | Chloroflexota | Candidatus Thermofontia | Candidatus Roseilinea | Candidatus Roseilinea sp. | |||
| 19486039 | 19486039 | PRJNA1255065_P_NODE_130316_length_165_cov_0.896552_g128088_i0 | PRJNA1255065 | 130316 | 165 | 0.896552 | 1.4793108 | Herpetosiphon aurantiacus | 65 | Bacteria | Bacteria | 281 | 1.62e-71 | NTclustered | gi|159889572|gb|CP000875.1| | 316274 | g128088 | i0 | 97.576 | 1 | 165 | 3 | 100 | 1 | 1 | 165 | 171203 | 171040 | Herpetosiphon aurantiacus DSM 785, complete genome | blastn | 165 | 281 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Herpetosiphonales | Herpetosiphonaceae | Herpetosiphon | Herpetosiphon aurantiacus | ||
| 22036975 | 22036975 | PRJNA1255065_P_NODE_23738_length_550_cov_1.770459_g21580_i0 | PRJNA1255065 | 23738 | 550 | 1.770459 | 9.7375245 | Candidatus Roseilinea sp. | 2838777 | Bacteria | Bacteria | 412 | 2.1599999999999993e-110 | NTclustered | gi|2314722916|dbj|AP024676.1| | 2838777 | g21580 | i0 | 80.541 | 61.7781818181818 | 555 | 93 | 100 | 13 | 1 | 550 | 3496080 | 3495536 | MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome | blastn | 33978 | 412 | 1 | Bacteria | Candidatus Thermofonsia Clade 3 | Bacillati | Chloroflexota | Candidatus Thermofontia | Candidatus Roseilinea | Candidatus Roseilinea sp. | |||
| 22037250 | 22037250 | PRJNA1255065_P_NODE_74218_length_211_cov_0.962963_g71990_i0 | PRJNA1255065 | 74218 | 211 | 0.962963 | 2.03185193 | Herpetosiphon aurantiacus | 65 | Bacteria | Bacteria | 150 | 6.389999999999998e-32 | NTclustered | gi|159889572|gb|CP000875.1| | 316274 | g71990 | i0 | 88.189 | 0.601895734597156 | 127 | 14 | 60 | 1 | 1 | 127 | 4626761 | 4626886 | Herpetosiphon aurantiacus DSM 785, complete genome | blastn | 127 | 150 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Herpetosiphonales | Herpetosiphonaceae | Herpetosiphon | Herpetosiphon aurantiacus | ||
| 23312410 | 23312410 | PRJNA1255065_P_NODE_151319_length_162_cov_0.920354_g149091_i0 | PRJNA1255065 | 151319 | 162 | 0.920354 | 1.49097348 | Tepidiforma flava | 3004094 | Bacteria | Bacteria | 261 | 2.06e-65 | NTclustered | gi|2421951025|gb|CP115149.1| | 3004094 | g149091 | i0 | 95.679 | 1.99382716049383 | 162 | 7 | 100 | 0 | 1 | 162 | 619362 | 619523 | Tepidiforma flava strain YIM 72310 chromosome, complete genome | blastn | 323 | 261 | 1 | Bacteria | Bacillati | Chloroflexota | Tepidiformia | Tepidiformales | Tepidiformaceae | Tepidiforma | Tepidiforma flava |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;