RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1255065" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 2 ✖

bioproject 1

  • PRJNA1255065 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8013939 8013939 PRJNA1255065_P_NODE_67007_length_226_cov_1.627119_g64779_i0 PRJNA1255065 67007 226 1.627119 3.67728894 Inoviridae sp. 2219103 Viruses Viruses 329 8.3e-86   NTclustered gi|1433280767|gb|MH552488.1| 2219103 g64779 i0 93.304 41.1371681415929 224 13 99 2 4 226 2278 2056 MAG: Inoviridae sp. isolate ctda6, complete genome blastn 9297 329 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
8014026 8014026 PRJNA1255065_P_NODE_78727_length_203_cov_1.012987_g76499_i0 PRJNA1255065 78727 203 1.012987 2.05636361 Inoviridae sp. 2219103 Viruses Viruses 370 4.3e-98   NTclustered gi|1433280767|gb|MH552488.1| 2219103 g76499 i0 99.507 18.5812807881773 203 1 100 0 1 203 1837 2039 MAG: Inoviridae sp. isolate ctda6, complete genome blastn 3772 370 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;