RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1255065" and tax_clade = "Candidatus Thermofonsia Clade 3"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 2 ✖

bioproject 1

  • PRJNA1255065 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18212125 18212125 PRJNA1255065_P_NODE_48435_length_298_cov_2.811245_g46209_i0 PRJNA1255065 48435 298 2.811245 8.3775101 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 213 1.2e-50   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g46209 i0 82.031 65.7080536912752 256 41 86 5 2 256 3494978 3494727 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 19581 213 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
22036975 22036975 PRJNA1255065_P_NODE_23738_length_550_cov_1.770459_g21580_i0 PRJNA1255065 23738 550 1.770459 9.7375245 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 412 2.1599999999999993e-110   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g21580 i0 80.541 61.7781818181818 555 93 100 13 1 550 3496080 3495536 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 33978 412 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;