contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA1253698" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 359614 | 359614 | PRJNA1253698_S_NODE_9001_length_229_cov_6.311111_g8635_i0 | PRJNA1253698 | 9001 | 229 | 6.311111 | 14.45244419 | uncultured Deinococcales bacterium | 310703 | Bacteria | Bacteria | 377 | 2.97e-100 | NTclustered | gi|336109605|gb|JN020214.1| | 310703 | g8635 | i0 | 98.148 | 81.9563318777293 | 216 | 4 | 94 | 0 | 14 | 229 | 1443 | 1228 | Uncultured Deinococcales bacterium clone cher8_1B_2 small subunit ribosomal RNA gene, partial sequence | blastn | 18768 | 377 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | uncultured Deinococcales bacterium | ||||
| 1634459 | 1634459 | PRJNA1253698_S_NODE_4462_length_329_cov_7.010714_g4096_i0 | PRJNA1253698 | 4462 | 329 | 7.010714 | 23.06524906 | Deinococcus sp. 35 | 457576 | Bacteria | Bacteria | 568 | 2.4899999999999995e-157 | NTclustered | gi|154268058|gb|EU024697.1| | 457576 | g4096 | i0 | 99.051 | 132.665653495441 | 316 | 3 | 96 | 0 | 4 | 319 | 715 | 400 | Deinococcus sp. 35 16S ribosomal RNA gene, partial sequence | blastn | 43647 | 568 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. 35 | ||
| 5463005 | 5463005 | PRJNA1253698_S_NODE_24505_length_153_cov_5.346154_g24139_i0 | PRJNA1253698 | 24505 | 153 | 5.346154 | 8.17961562 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 219 | 1.1699999999999999e-52 | NTclustered | gi|2108366028|gb|CP070651.1| | 2026798 | g24139 | i0 | 93.793 | 270.457516339869 | 145 | 9 | 95 | 0 | 9 | 153 | 9426 | 9570 | MAG: Trueperaceae bacterium isolate bin86 chromosome | blastn | 41380 | 219 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 11256108 | 11256108 | PRJNA1253698_S_NODE_3329_length_382_cov_4.324324_g2964_i0 | PRJNA1253698 | 3329 | 382 | 4.324324 | 16.51891768 | Truepera | 332248 | Bacteria | Bacteria | 608 | 1.719999999999999e-169 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g2964 | i0 | 95.312 | 200.609947643979 | 384 | 16 | 100 | 1 | 1 | 382 | 1796 | 2179 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 76633 | 608 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 24004856 | 24004856 | PRJNA1253698_S_NODE_7059_length_258_cov_3.837321_g6693_i0 | PRJNA1253698 | 7059 | 258 | 3.837321 | 9.90028818 | Deinococcus | 1298 | Bacteria | Bacteria | 303 | 5.87e-78 | NTclustered | gi|470486828|ref|NR_076782.1| | 502394 | g6693 | i0 | 88.98 | 126.03488372093 | 245 | 27 | 95 | 0 | 14 | 258 | 296 | 52 | Deinococcus gobiensis strain I-0 23S ribosomal RNA gene, complete sequence | blastn | 32517 | 303 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus gobiensis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;