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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1253698" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 9 ✖

bioproject 1

  • PRJNA1253698 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
359563 359563 PRJNA1253698_S_NODE_18261_length_168_cov_3.310924_g17895_i0 PRJNA1253698 18261 168 3.310924 5.56235232 Skokie dicistro-like virus 2789443 Viruses Viruses 263 5.989999999999999e-66   NTclustered gi|1935607033|gb|MT747992.1| 2789443 g17895 i0 96.25 1.67857142857143 160 6 95 0 1 160 8501 8660 Skokie dicistro-like virus strain USAdf-2 polyprotein 1 and polyprotein 2 genes, complete cds blastn 282 263 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
1634450 1634450 PRJNA1253698_S_NODE_2902_length_416_cov_5.539510_g2538_i0 PRJNA1253698 2902 416 5.53951 23.0443616 Skokie dicistro-like virus 2789443 Viruses Viruses 586 8.87e-163   NTclustered gi|1935607033|gb|MT747992.1| 2789443 g2538 i0 98.209 0.805288461538462 335 6 81 0 1 335 335 1 Skokie dicistro-like virus strain USAdf-2 polyprotein 1 and polyprotein 2 genes, complete cds blastn 335 586 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
6737398 6737398 PRJNA1253698_S_NODE_20946_length_165_cov_0.896552_g20580_i0 PRJNA1253698 20946 165 0.896552 1.4793108 Tobamovirus fructirugosum 3432872 Viruses Viruses 305 9.59e-79   NTclustered gi|2837380181|gb|PP099897.1| 1761477 g20580 i0 100 100 165 0 100 0 1 165 2469 2305 Tomato brown rugose fruit virus isolate NPPO-NL 36648757, complete genome blastn 16500 305 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
8013067 8013067 PRJNA1253698_S_NODE_1167_length_1058_cov_6.127849_g883_i0 PRJNA1253698 1167 1058 6.127849 64.83264242 Skokie dicistro-like virus 2789443 Viruses Viruses 1847 0   NTclustered gi|1935607033|gb|MT747992.1| 2789443 g883 i0 98.202 0.999054820415879 1057 19 99 0 2 1058 1367 311 Skokie dicistro-like virus strain USAdf-2 polyprotein 1 and polyprotein 2 genes, complete cds blastn 1057 1847 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
9287908 9287908 PRJNA1253698_S_NODE_828_length_2798_cov_7.310295_g637_i0 PRJNA1253698 828 2798 7.310295 204.5420541 Skokie dicistro-like virus 2789443 Viruses Viruses 4634 0   NTclustered gi|1935607033|gb|MT747992.1| 2789443 g637 i0 96.568 1.5360972122945 2797 96 99 0 2 2798 4164 1368 Skokie dicistro-like virus strain USAdf-2 polyprotein 1 and polyprotein 2 genes, complete cds blastn 4298 4634 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
13113562 13113562 PRJNA1253698_S_NODE_651_length_4373_cov_8.246531_g501_i0 PRJNA1253698 651 4373 8.246531 360.62080063 Skokie dicistro-like virus 2789443 Viruses Viruses 7371 0   NTclustered gi|2806502719|gb|PQ054859.1| 2789443 g501 i0 97.095 3.38989252229591 4372 127 99 0 2 4373 5230 859 MAG: Skokie dicistro-like virus isolate QJ5MS4721 genomic sequence blastn 14824 7371 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
16936881 16936881 PRJNA1253698_S_NODE_10014_length_217_cov_4.464286_g9648_i0 PRJNA1253698 10014 217 4.464286 9.68750062 Alphapartitivirus sp. 2809141 Viruses Viruses 111 3.12e-20   NTclustered gi|2120560313|gb|MZ556440.1| 2809141 g9648 i0 95.652 192.179723502304 69 3 32 0 1 69 1943 2011 MAG: Alphapartitivirus sp. isolate s20-k141_862889 putative RNA-dependent RNA polymerase gene, complete cds blastn 41703 111 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Alphapartitivirus Alphapartitivirus sp.
17630362 17630362 PRJNA1253698_S_NODE_10594_length_212_cov_1.251534_g10228_i0 PRJNA1253698 10594 212 1.251534 2.65325208 Tobamovirus 12234 Viruses Viruses 381 2.0899999999999994e-101   NTclustered gi|2647550519|gb|OR843964.1| 12242 g10228 i0 100 97.1698113207547 206 0 97 0 7 212 2265 2060 Tobacco mosaic virus strain MR644-18E/3430 nonstructural polyprotein p183, nonstructural polyprotein p126, and movement protein genes, partial cds blastn 20600 381 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
24585953 24585953 PRJNA1253698_S_NODE_19980_length_166_cov_1.128205_g19614_i0 PRJNA1253698 19980 166 1.128205 1.8728203 Tobamovirus fructirugosum 3432872 Viruses Viruses 300 4.5e-77   NTclustered gi|1805995756|gb|MN882044.1| 1761477 g19614 i0 99.394 99.3975903614458 165 1 99 0 1 165 4654 4818 Tomato brown rugose fruit virus isolate 39563388_A, complete genome blastn 16500 300 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;