contig_metadata
4 rows where analysis = "blastn", bioproject = "PRJNA1253698" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 359598 | 359598 | PRJNA1253698_S_NODE_6001_length_280_cov_2.428571_g5635_i0 | PRJNA1253698 | 6001 | 280 | 2.428571 | 6.7999988 | Nostoc sp. PCC 7524 | 28072 | Bacteria | Bacteria | 294 | 3.88e-75 | NTclustered | gi|427363208|gb|CP003552.1| | 28072 | g5635 | i0 | 88.889 | 44.3821428571429 | 243 | 22 | 86 | 3 | 15 | 254 | 5042385 | 5042625 | Nostoc sp. PCC 7524, complete genome | blastn | 12427 | 294 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc sp. PCC 7524 | |
| 5463022 | 5463022 | PRJNA1253698_S_NODE_6665_length_266_cov_2.373272_g6299_i0 | PRJNA1253698 | 6665 | 266 | 2.373272 | 6.31290352 | Halotia branconii | 1620816 | Bacteria | Bacteria | 309 | 1.31e-79 | NTclustered | gi|2500982325|gb|CP124543.1| | 1539056 | g6299 | i0 | 90.909 | 69.6842105263158 | 231 | 19 | 86 | 2 | 37 | 265 | 3508430 | 3508200 | Halotia branconii CENA392 chromosome, complete genome | blastn | 18536 | 309 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nodulariaceae | Halotia | Halotia branconii | |
| 20761228 | 20761228 | PRJNA1253698_S_NODE_19297_length_167_cov_0.881356_g18931_i0 | PRJNA1253698 | 19297 | 167 | 0.881356 | 1.47186452 | Pleurocapsa sp. FMAR1 | 3040204 | Bacteria | Bacteria | 191 | 2.85e-44 | NTclustered | gi|2621703423|emb|OY762512.1| | 3040204 | g18931 | i0 | 88.125 | 0.958083832335329 | 160 | 19 | 96 | 0 | 4 | 163 | 1448726 | 1448885 | Pleurocapsa sp. FMAR1 isolate 44838 genome assembly, chromosome: 1 | blastn | 160 | 191 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Pleurocapsales | Hyellaceae | Pleurocapsa | Pleurocapsa sp. FMAR1 | |
| 23311850 | 23311850 | PRJNA1253698_S_NODE_14719_length_183_cov_2.373134_g14353_i0 | PRJNA1253698 | 14719 | 183 | 2.373134 | 4.34283522 | Aliterella chasmolithica | 2739056 | Bacteria | Bacteria | 289 | 1.0899999999999998e-73 | NTclustered | gi|1713066352|gb|MN243145.1| | 2599943 | g14353 | i0 | 95.082 | 126.469945355191 | 183 | 9 | 100 | 0 | 1 | 183 | 2171 | 1989 | Aliterella chasmolithica PJ S15 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 23144 | 289 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Aliterellaceae | Aliterella | Aliterella chasmolithica |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;