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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA1253303" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 10 ✖

bioproject 1

  • PRJNA1253303 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7430504 7430504 PRJNA1253303_P_NODE_8566_length_238_cov_2.587879_g8544_i0 PRJNA1253303 8566 238 2.587879 6.15915202 Naegleria 5761 Heterolobosea other_Eukaryota 436 5.049999999999999e-118   NTclustered gi|2618963742|gb|OR769034.1| 5762 g8544 i0 100 28.7773109243697 236 0 99 0 1 236 3801 4036 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 6849 436 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8012870 8012870 PRJNA1253303_P_NODE_3267_length_300_cov_2.396476_g3245_i0 PRJNA1253303 3267 300 2.396476 7.189428 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 305 1.94e-78   NTclustered gi|1002458955|ref|XM_015798018.1| 157538 g3245 i0 85.099 155.67 302 41 100 4 1 300 421 720 Leptomonas pyrrhocoris putative mitochondrial heat-shock protein hsp70 mRNA blastn 46701 305 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
8012933 8012933 PRJNA1253303_P_NODE_5907_length_250_cov_0.881356_g5885_i0 PRJNA1253303 5907 250 0.881356 2.20339 Herpetomonas muscarum 5718 Euglenozoa other_Eukaryota 270 5.74e-68   NTclustered gi|529495907|gb|KC503386.1| 5718 g5885 i0 87.029 6.348 239 31 96 0 2 240 260 22 Herpetomonas muscarum clone H1_2.5.1.6 methionine adenosyltransferase gene, complete cds blastn 1587 270 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Herpetomonas Herpetomonas muscarum
11838078 11838078 PRJNA1253303_P_NODE_4430_length_265_cov_1.218750_g4408_i0 PRJNA1253303 4430 265 1.21875 3.2296875 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 436 5.719999999999999e-118   NTclustered gi|226347408|gb|FJ807243.1| 56466 g4408 i0 96.226 104.592452830189 265 10 100 0 1 265 381 117 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 27717 436 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
15662258 15662258 PRJNA1253303_P_NODE_1053_length_477_cov_1.259901_g1031_i0 PRJNA1253303 1053 477 1.259901 6.00972777 Heterolobosea sp. BA 373143 Heterolobosea other_Eukaryota 462 1.81e-125   NTclustered gi|89148137|gb|DQ388522.1| 373143 g1031 i0 84.44 97.5786163522013 482 61 99 10 3 477 241 715 Heterolobosea sp. BA beta-tubulin gene, partial cds blastn 46545 462 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. BA
16936682 16936682 PRJNA1253303_P_NODE_3514_length_292_cov_1.178082_g3492_i0 PRJNA1253303 3514 292 1.178082 3.43999944 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 388 1.82e-103   NTclustered gi|290987763|ref|XM_002676546.1| 5762 g3492 i0 90.753 391.003424657534 292 26 100 1 1 292 320 30 Naegleria gruberi polyubiquitin (NAEGRDRAFT_55791), mRNA blastn 114173 388 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16936808 16936808 PRJNA1253303_P_NODE_914_length_509_cov_1.073394_g892_i0 PRJNA1253303 914 509 1.073394 5.46357546 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 608 2.359999999999999e-169   NTclustered gi|226347408|gb|FJ807243.1| 56466 g892 i0 87.819 42.3202357563851 509 58 99 3 1 507 357 863 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 21541 608 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
18211128 18211128 PRJNA1253303_P_NODE_2975_length_312_cov_1.305439_g2953_i0 PRJNA1253303 2975 312 1.305439 4.07296968 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 472 1.8899999999999998e-128   NTclustered gi|226347408|gb|FJ807243.1| 56466 g2953 i0 93.226 62.6634615384615 310 21 99 0 3 312 679 370 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 19551 472 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
18211190 18211190 PRJNA1253303_P_NODE_6035_length_250_cov_0.881356_g6013_i0 PRJNA1253303 6035 250 0.881356 2.20339 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 204 5.909999999999999e-48   NTclustered gi|1002447873|ref|XM_015802945.1| 157538 g6013 i0 83.408 22.412 223 33 88 4 11 231 227 7 Leptomonas pyrrhocoris putative mitochondrial 40S ribosomal protein S9 mRNA blastn 5603 204 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
24585754 24585754 PRJNA1253303_P_NODE_4680_length_258_cov_1.610811_g4658_i0 PRJNA1253303 4680 258 1.610811 4.15589238 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 152 2.2499999999999995e-32   NTclustered gi|2124400853|ref|XM_044699456.1| 51637 g4658 i0 85.517 4.46899224806202 145 21 56 0 1 145 301 157 Naegleria lovaniensis uncharacterized protein (C9374_009286), partial mRNA blastn 1153 152 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;