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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1253303" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 8 ✖

bioproject 1

  • PRJNA1253303 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6737138 6737138 PRJNA1253303_P_NODE_2346_length_341_cov_1.757463_g2324_i0 PRJNA1253303 2346 341 1.757463 5.99294883 Cavenderia fasciculata 261658 Evosea other_Eukaryota 122 2.4199999999999998e-23   NTclustered gi|470265703|ref|XM_004361527.1| 261658 g2324 i0 87.85 2.63929618768328 107 10 30 1 17 120 455 349 Cavenderia fasciculata annexin VII (nxnA), partial mRNA blastn 900 122 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
11255885 11255885 PRJNA1253303_P_NODE_4449_length_264_cov_1.376963_g4427_i0 PRJNA1253303 4449 264 1.376963 3.63518232 Dictyostelium 5782 Evosea other_Eukaryota 150 8.31e-32   NTclustered gi|167577|gb|M58022.1|DDIABP 44689 g4427 i0 81.25 2.91666666666667 192 31 72 5 71 261 373 560 Dictyostelium 30,000 dalton actin bundling protein mRNA, complete cds blastn 770 150 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
16936671 16936671 PRJNA1253303_P_NODE_3074_length_308_cov_1.400000_g3052_i0 PRJNA1253303 3074 308 1.4 4.312 Cavenderia fasciculata 261658 Evosea other_Eukaryota 228 4.449999999999999e-55   NTclustered gi|470252539|ref|XM_004359310.1| 261658 g3052 i0 80.969 53.3538961038961 289 53 94 2 1 288 117 404 Cavenderia fasciculata ADP-ribosylation factor (arfA), partial mRNA blastn 16433 228 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
18211098 18211098 PRJNA1253303_P_NODE_1535_length_406_cov_1.600601_g1513_i0 PRJNA1253303 1535 406 1.600601 6.49844006 Vannella ebro 207334 Discosea other_Eukaryota 545 1.47e-150   NTclustered gi|33946344|gb|AY294151.1| 207334 g1513 i0 90.887 99.7512315270936 406 37 100 0 1 406 15 420 Vannella ebro actin mRNA, complete cds blastn 40499 545 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
18211130 18211130 PRJNA1253303_P_NODE_3115_length_307_cov_0.995726_g3093_i0 PRJNA1253303 3115 307 0.995726 3.05687882 Platyamoeba placida 3454475 Discosea other_Eukaryota 448 3.1299999999999993e-121   NTclustered gi|33946348|gb|AY294153.1| 197527 g3093 i0 93.377 93.8925081433225 302 20 98 0 2 303 767 1068 Platyamoeba placida actin mRNA, partial cds blastn 28825 448 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
20761069 20761069 PRJNA1253303_P_NODE_6617_length_248_cov_0.891429_g6595_i0 PRJNA1253303 6617 248 0.891429 2.21074392 Acytostelium subglobosum 361139 Evosea other_Eukaryota 239 1.6e-58   NTclustered gi|831766831|ref|XM_012896462.1| 1410327 g6595 i0 84.146 17.6774193548387 246 39 99 0 3 248 257 12 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 4384 239 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
23311684 23311684 PRJNA1253303_P_NODE_5319_length_252_cov_0.871508_g5297_i0 PRJNA1253303 5319 252 0.871508 2.19620016 Dictyostelium purpureum 5786 Evosea other_Eukaryota 187 6e-43   NTclustered gi|330842931|ref|XM_003293373.1| 5786 g5297 i0 90.714 44.3690476190476 140 13 56 0 9 148 950 1089 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_90232), partial mRNA blastn 11181 187 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
24585723 24585723 PRJNA1253303_P_NODE_3600_length_289_cov_1.370370_g3578_i0 PRJNA1253303 3600 289 1.37037 3.9603693 Acytostelium subglobosum 361139 Evosea other_Eukaryota 65.8 3.44e-6   NTclustered gi|831764699|ref|XM_012895807.1| 1410327 g3578 i0 91.667 0.166089965397924 48 3 16 1 157 203 1625 1578 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 48 65.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;