RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1249535" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1249535 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14384403 14384403 PRJNA1249535_S_NODE_122432_length_354_cov_7.711744_g119049_i0 PRJNA1249535 122432 354 7.711744 27.29957376 Thermoplasmata archaeon 1906666 Archaea Archaea 52.8 0.033   NTclustered gi|2108430933|gb|CP070629.1| 1906666 g119049 i0 100 0.0790960451977401 28 0 8 0 308 335 888303 888276 MAG: Thermoplasmata archaeon isolate bin983 chromosome blastn 28 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
20760537 20760537 PRJNA1249535_S_NODE_79137_length_403_cov_1.415152_g75756_i0 PRJNA1249535 79137 403 1.415152 5.70306256 Ferroplasma acidiphilum 74969 Archaea Archaea 52.8 0.039   NTclustered gi|2573967612|gb|CP133600.1| 74969 g75756 i0 100 0.0694789081885856 28 0 7 0 167 194 274902 274875 MAG: Ferroplasma acidiphilum isolate BR_01 chromosome, complete genome blastn 28 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Ferroplasmaceae Ferroplasma Ferroplasma acidiphilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;