RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1249535" and tax_phylum = "Nematomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1249535 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6735731 6735731 PRJNA1249535_S_NODE_334406_length_230_cov_2.515924_g331023_i0 PRJNA1249535 334406 230 2.515924 5.7866252 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 54.7 0.006   NTclustered gi|2733951612|ref|XM_065460310.1| 3053472 g331023 i0 90.476 0.182608695652174 42 2 18 2 178 218 3268 3308 PREDICTED: Gordionus sp. m RMFG-2023 26S proteasome non-ATPase regulatory subunit 2-like (LOC135925122), mRNA blastn 42 54.7 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
18209045 18209045 PRJNA1249535_S_NODE_278795_length_264_cov_3.628272_g275412_i0 PRJNA1249535 278795 264 3.628272 9.57863808 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 52.8 0.024   NTclustered gi|2733959932|ref|XM_065464394.1| 3053472 g275412 i0 96.774 0.117424242424242 31 1 12 0 45 75 219 189 PREDICTED: Gordionus sp. m RMFG-2023 protein KTI12 homolog (LOC135928063), mRNA blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;