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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1249535" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 12 ✖

bioproject 1

  • PRJNA1249535 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
355276 355276 PRJNA1249535_S_NODE_128281_length_350_cov_3.050542_g124898_i0 PRJNA1249535 128281 350 3.050542 10.676897 Methanosphaera stadtmanae 2317 Archaea Archaea 52.8 0.033   NTclustered gi|1721134173|emb|LR698975.1| 2317 g124898 i0 100 0.24 28 0 8 0 322 349 159729 159702 Methanosphaera stadtmanae isolate MGYG-HGUT-02164 genome assembly, chromosome: 1 blastn 84 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera stadtmanae
4184901 4184901 PRJNA1249535_S_NODE_313664_length_245_cov_7.139535_g310281_i0 PRJNA1249535 313664 245 7.139535 17.49186075 Methanosalsum zhilinae 39669 Archaea Archaea 56.5 0.002   NTclustered gi|335929340|gb|CP002101.1| 679901 g310281 i0 100 0.122448979591837 30 0 12 0 98 127 1665167 1665138 Methanosalsum zhilinae DSM 4017, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosalsum Methanosalsum zhilinae
8012074 8012074 PRJNA1249535_S_NODE_59727_length_446_cov_7.222520_g56358_i0 PRJNA1249535 59727 446 7.22252 32.2124392 Methanocaldococcus vulcanius 73913 Archaea Archaea 54.7 0.012   NTclustered gi|261369124|gb|CP001787.1| 579137 g56358 i0 100 0.0650224215246637 29 0 7 0 154 182 1546970 1546942 Methanocaldococcus vulcanius M7, complete genome blastn 29 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus vulcanius
11255809 11255809 PRJNA1249535_S_NODE_58369_length_450_cov_10.732095_g55003_i0 PRJNA1249535 58369 450 10.732095 48.2944275 Methanosarcina 2207 Archaea Archaea 56.5 0.003   NTclustered gi|1111741292|dbj|AP017646.1| 2210 g55003 i0 100 0.266666666666667 30 0 7 0 268 297 2444796 2444825 Methanosarcina thermophila DNA, complete genome, strain: MT-1 blastn 120 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina thermophila
14384403 14384403 PRJNA1249535_S_NODE_122432_length_354_cov_7.711744_g119049_i0 PRJNA1249535 122432 354 7.711744 27.29957376 Thermoplasmata archaeon 1906666 Archaea Archaea 52.8 0.033   NTclustered gi|2108430933|gb|CP070629.1| 1906666 g119049 i0 100 0.0790960451977401 28 0 8 0 308 335 888303 888276 MAG: Thermoplasmata archaeon isolate bin983 chromosome blastn 28 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
15080046 15080046 PRJNA1249535_S_NODE_161952_length_328_cov_0.945098_g158569_i0 PRJNA1249535 161952 328 0.945098 3.09992144 Methanosarcina 2207 Archaea Archaea 52.8 0.031   NTclustered gi|805354519|gb|CP009508.1| 1434118 g158569 i0 100 0.25609756097561 28 0 9 0 76 103 2456182 2456209 Methanosarcina siciliae C2J, complete genome blastn 84 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina siciliae
16933579 16933579 PRJNA1249535_S_NODE_200154_length_306_cov_3.111588_g196771_i0 PRJNA1249535 200154 306 3.111588 9.52145928 Methanotorris igneus 2189 Archaea Archaea 52.8 0.029   NTclustered gi|333750483|gb|CP002737.1| 880724 g196771 i0 100 0.0915032679738562 28 0 9 0 67 94 230316 230343 Methanotorris igneus Kol 5, complete genome blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanotorris Methanotorris igneus
19482290 19482290 PRJNA1249535_S_NODE_188136_length_313_cov_1.300000_g184753_i0 PRJNA1249535 188136 313 1.3 4.069 Methanosarcina barkeri 2208 Archaea Archaea 52.8 0.029   NTclustered gi|805384997|gb|CP009517.1| 1434107 g184753 i0 100 0.0894568690095847 28 0 9 0 128 155 4491270 4491297 Methanosarcina barkeri 3, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri
20757158 20757158 PRJNA1249535_S_NODE_144977_length_338_cov_4.898113_g141594_i0 PRJNA1249535 144977 338 4.898113 16.55562194 Methanogenium organophilum 2199 Archaea Archaea 52.8 0.032   NTclustered gi|2388587735|gb|CP113361.1| 2199 g141594 i0 100 0.0828402366863905 28 0 8 0 151 178 1216724 1216751 Methanogenium organophilum strain DSM 3596 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium organophilum
20760537 20760537 PRJNA1249535_S_NODE_79137_length_403_cov_1.415152_g75756_i0 PRJNA1249535 79137 403 1.415152 5.70306256 Ferroplasma acidiphilum 74969 Archaea Archaea 52.8 0.039   NTclustered gi|2573967612|gb|CP133600.1| 74969 g75756 i0 100 0.0694789081885856 28 0 7 0 167 194 274902 274875 MAG: Ferroplasma acidiphilum isolate BR_01 chromosome, complete genome blastn 28 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Ferroplasmaceae Ferroplasma Ferroplasma acidiphilum
23310884 23310884 PRJNA1249535_S_NODE_60339_length_445_cov_1.940860_g56970_i0 PRJNA1249535 60339 445 1.94086 8.636827 Methanosarcina sp. MTP4 1434100 Archaea Archaea 54.7 0.012   NTclustered gi|805342629|gb|CP009505.1| 1434100 g56970 i0 96.875 0.0719101123595506 32 1 7 0 156 187 1786294 1786263 Methanosarcina sp. MTP4, complete genome blastn 32 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. MTP4
24582523 24582523 PRJNA1249535_S_NODE_184360_length_315_cov_1.780992_g180977_i0 PRJNA1249535 184360 315 1.780992 5.6101248 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 52.8 0.029   NTclustered gi|2695672541|gb|CP118754.2| 1452353 g180977 i0 100 0.0888888888888889 28 0 9 0 119 146 141740 141713 Methanosphaera sp. ISO3-F5 plasmid pNP174, complete sequence blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;