contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA1249535" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2909402 | 2909402 | PRJNA1249535_S_NODE_6523_length_961_cov_14.905405_g489_i1 | PRJNA1249535 | 6523 | 961 | 14.905405 | 143.24094205 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 56.5 | 0.008 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g489 | i1 | 100 | 0.0915712799167534 | 30 | 0 | 3 | 0 | 655 | 684 | 1852334 | 1852363 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 88 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 4183608 | 4183608 | PRJNA1249535_S_NODE_206604_length_303_cov_1.017391_g203221_i0 | PRJNA1249535 | 206604 | 303 | 1.017391 | 3.08269473 | Roseimaritima ulvae | 980254 | Bacteria | Bacteria | 459 | 1.4199999999999996e-124 | NTclustered | gi|1727550343|gb|CP042914.1| | 980254 | g203221 | i0 | 94.059 | 212.3300330033 | 303 | 16 | 99 | 1 | 3 | 303 | 6160309 | 6160007 | Roseimaritima ulvae strain UC8 chromosome, complete genome | blastn | 64336 | 459 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Roseimaritima | Roseimaritima ulvae | |
| 5462572 | 5462572 | PRJNA1249535_S_NODE_965_length_1925_cov_20.231641_g489_i0 | PRJNA1249535 | 965 | 1925 | 20.231641 | 389.45908925 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 56.5 | 0.015 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g489 | i0 | 100 | 0.0155844155844156 | 30 | 0 | 2 | 0 | 278 | 307 | 1852363 | 1852334 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 30 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 6735071 | 6735071 | PRJNA1249535_S_NODE_275546_length_266_cov_2.720207_g272163_i0 | PRJNA1249535 | 275546 | 266 | 2.720207 | 7.23575062 | Stieleria varia | 2528005 | Bacteria | Bacteria | 470 | 5.669999999999999e-128 | NTclustered | gi|2720418917|gb|CP151726.1| | 2528005 | g272163 | i0 | 98.496 | 141.868421052632 | 266 | 4 | 100 | 0 | 1 | 266 | 2278152 | 2278417 | Stieleria varia strain Pla52n chromosome, complete genome | blastn | 37737 | 470 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Stieleria | Stieleria varia | |
| 9283702 | 9283702 | PRJNA1249535_S_NODE_132688_length_347_cov_2.076642_g129305_i0 | PRJNA1249535 | 132688 | 347 | 2.076642 | 7.20594774 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 544 | 4.45e-150 | NTclustered | gi|338182594|gb|JF983102.1| | 156588 | g129305 | i0 | 96.914 | 95.2939481268012 | 324 | 10 | 93 | 0 | 1 | 324 | 198 | 521 | Uncultured Verrucomicrobia bacterium clone Upland_75_2390 16S ribosomal RNA gene, partial sequence | blastn | 33067 | 544 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 9286814 | 9286814 | PRJNA1249535_S_NODE_60188_length_445_cov_4.231183_g56819_i0 | PRJNA1249535 | 60188 | 445 | 4.231183 | 18.82876435 | Sedimentisphaerales bacterium | 2813034 | Bacteria | Bacteria | 60.2 | 2.57e-4 | NTclustered | gi|2621701142|emb|OY759675.1| | 2813034 | g56819 | i0 | 100 | 0.0719101123595506 | 32 | 0 | 7 | 0 | 314 | 345 | 3644773 | 3644742 | MAG: Sedimentisphaerales bacterium isolate f0e5d044-1a19-4baf-a299-9636c83af3ad genome assembly, chromosome: 1 | blastn | 32 | 60.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Sedimentisphaerales bacterium | |||
| 14385201 | 14385201 | PRJNA1249535_S_NODE_180872_length_317_cov_1.553279_g177489_i0 | PRJNA1249535 | 180872 | 317 | 1.553279 | 4.92389443 | Chlamydiales bacterium QZY | 2803004 | Bacteria | Bacteria | 418 | 2.5399999999999995e-112 | NTclustered | gi|1955632013|gb|MW471098.1| | 2803004 | g177489 | i0 | 90.596 | 116.141955835962 | 319 | 24 | 100 | 4 | 1 | 317 | 171 | 485 | Chlamydiales bacterium QZY 16S ribosomal RNA gene, partial sequence | blastn | 36817 | 418 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium QZY | |||
| 15080111 | 15080111 | PRJNA1249535_S_NODE_68912_length_422_cov_16.120344_g65532_i0 | PRJNA1249535 | 68912 | 422 | 16.120344 | 68.02785168 | Chlamydia | 810 | Bacteria | Bacteria | 54.7 | 0.011 | NTclustered | gi|1032413971|gb|CP015840.1| | 1143323 | g65532 | i0 | 96.97 | 0.625592417061611 | 33 | 0 | 8 | 1 | 287 | 318 | 817081 | 817113 | Chlamydia gallinacea 08-1274/3, complete genome | blastn | 264 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia gallinacea | |
| 18207835 | 18207835 | PRJNA1249535_S_NODE_180915_length_317_cov_1.303279_g177532_i0 | PRJNA1249535 | 180915 | 317 | 1.303279 | 4.13139443 | Candidatus Methylacidiphilum infernorum | 511746 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1999105499|gb|CP065956.1| | 511746 | g177532 | i0 | 94.595 | 0.116719242902208 | 37 | 0 | 12 | 2 | 58 | 94 | 617559 | 617593 | Candidatus Methylacidiphilum infernorum strain IT5 chromosome, complete genome | blastn | 37 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidiphilae | Methylacidiphilales | Methylacidiphilaceae | Methylacidiphilum (ex Ratnadevi et al. 2023) | Candidatus Methylacidiphilum infernorum | |
| 19483214 | 19483214 | PRJNA1249535_S_NODE_260776_length_274_cov_2.706468_g257393_i0 | PRJNA1249535 | 260776 | 274 | 2.706468 | 7.41572232 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 398 | 2.8099999999999998e-106 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g257393 | i0 | 92.78 | 108.934306569343 | 277 | 17 | 100 | 3 | 1 | 274 | 7052242 | 7052518 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 29848 | 398 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 20757081 | 20757081 | PRJNA1249535_S_NODE_139777_length_342_cov_2.401487_g136394_i0 | PRJNA1249535 | 139777 | 342 | 2.401487 | 8.21308554 | Roseimaritima ulvae | 980254 | Bacteria | Bacteria | 235 | 2.99e-57 | NTclustered | gi|1727550343|gb|CP042914.1| | 980254 | g136394 | i0 | 87.624 | 19.7017543859649 | 202 | 25 | 59 | 0 | 141 | 342 | 6157414 | 6157615 | Roseimaritima ulvae strain UC8 chromosome, complete genome | blastn | 6738 | 235 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Roseimaritima | Roseimaritima ulvae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;