RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1249535" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1249535 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11837671 11837671 PRJNA1249535_S_NODE_83390_length_396_cov_3.222910_g80008_i0 PRJNA1249535 83390 396 3.22291 12.7627236 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 52.8 0.038   NTclustered gi|2314743697|dbj|AP026679.1| 2099670 g80008 i0 100 0.0707070707070707 28 0 7 0 29 56 623013 622986 MAG: Candidatus Dojkabacteria bacterium KatS3mg084 DNA, complete genome blastn 28 52.8 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
13109739 13109739 PRJNA1249535_S_NODE_162971_length_327_cov_3.275591_g159588_i0 PRJNA1249535 162971 327 3.275591 10.71118257 uncultured Poribacteria bacterium 265321 Bacteria Bacteria 52.8 0.031   NTclustered gi|2546137836|emb|OY282383.1| 265321 g159588 i0 100 0.0856269113149847 28 0 9 0 72 99 980835 980862 MAG: uncultured Poribacteria bacterium isolate 7c199f84-8048-4b63-b208-6e17c6421a0a genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         uncultured Poribacteria bacterium
14386913 14386913 PRJNA1249535_S_NODE_321572_length_241_cov_4.720238_g318189_i0 PRJNA1249535 321572 241 4.720238 11.37577358 Candidatus Ozemobacteraceae bacterium 2818468 Bacteria Bacteria 56.5 0.002   NTclustered gi|2907625676|emb|OZ223236.1| 2818468 g318189 i0 96.97 0.136929460580913 33 1 14 0 27 59 4278352 4278320 MAG: Candidatus Ozemobacteraceae bacterium isolate 4ee0fdf2-fbb4-4151-bfa0-813162405533 genome assembly, chromosome: 2 blastn 33 56.5 1 Bacteria Bacteria candidate phyla     Candidatus Ozemobacteria   Candidatus Ozemobacteraceae   Candidatus Ozemobacteraceae bacterium
19485150 19485150 PRJNA1249535_S_NODE_89356_length_387_cov_8.210191_g85974_i0 PRJNA1249535 89356 387 8.210191 31.77343917 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 52.8 0.037   NTclustered gi|2874253748|emb|OY969622.1| 2803731 g85974 i0 100 0.0723514211886305 28 0 7 0 10 37 375898 375871 MAG: Candidatus Babeliales bacterium isolate MFD04434.bin.c.2 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;