RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1249042" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1249042 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9282381 9282381 PRJNA1249042_S_NODE_105908_length_157_cov_1.684211_g105694_i0 PRJNA1249042 105908 157 1.684211 2.64421127 Asplanchna sieboldii 84397 Rotifera other_Eukaryota 268 1.1799999999999998e-67   NTclustered gi|61200811|gb|AY829085.1| 84397 g105694 i0 97.452 71.687898089172 157 4 100 0 1 157 2510 2354 Asplanchna sieboldi 28S ribosomal RNA gene, partial sequence blastn 11255 268 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii
13805542 13805542 PRJNA1249042_S_NODE_10271_length_306_cov_4.243346_g10057_i0 PRJNA1249042 10271 306 4.243346 12.98463876 Adinetidae 104780 Rotifera other_Eukaryota 560 3.84e-155   NTclustered gi|2537903787|gb|KM043252.2| 104782 g10057 i0 99.673 99.9967320261438 306 1 100 0 1 306 891 586 Adineta vaga voucher AD005 18S ribosomal RNA gene, partial sequence blastn 30599 560 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;