RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1249042" and tax_phylum = "Nucleocytoviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nucleocytoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1249042 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9283166 9283166 PRJNA1249042_S_NODE_9788_length_310_cov_4.528090_g9574_i0 PRJNA1249042 9788 310 4.52809 14.037079 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.029   NTclustered gi|9964314|ref|NC_002520.1| 28321 g9574 i0 94.286 0.112903225806452 35 1 11 1 95 128 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
20756127 20756127 PRJNA1249042_S_NODE_52797_length_206_cov_3.773006_g52583_i0 PRJNA1249042 52797 206 3.773006 7.7723923599999996 Mimiviridae sp. ChoanoV1 2596887 Viruses Viruses 54.7 0.005   NTclustered gi|1717456131|gb|MK250089.1| 2596887 g52583 i0 92.308 0.189320388349515 39 2 18 1 147 184 68236 68198 Mimiviridae sp. ChoanoV1 genomic sequence blastn 39 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Schizomimiviridae   Mimiviridae sp. ChoanoV1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;