RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1249042" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1249042 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
354070 354070 PRJNA1249042_S_NODE_114341_length_151_cov_161.370370_g114127_i0 PRJNA1249042 114341 151 161.37037 243.6692587 Mucor mucedo 29922 Fungi Fungi 58.4 2.65e-4   NTclustered gi|2324075884|ref|XM_051603668.1| 29922 g114127 i0 94.737 0.251655629139073 38 0 25 1 45 82 253 218 Mucor mucedo uncharacterized protein (EV154DRAFT_529412), mRNA blastn 38 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
354261 354261 PRJNA1249042_S_NODE_31181_length_239_cov_1.959184_g30967_i0 PRJNA1249042 31181 239 1.959184 4.68244976 Phycomyces blakesleeanus 4837 Fungi Fungi 82.4 2.74e-11   NTclustered gi|1069937857|ref|XM_018438040.1| 763407 g30967 i0 77.181 5.25941422594142 149 29 62 5 91 238 346 202 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 1257 82.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
3602817 3602817 PRJNA1249042_S_NODE_65743_length_192_cov_1.577181_g65529_i0 PRJNA1249042 65743 192 1.577181 3.02818752 Blakeslea 4849 Fungi Fungi 355 1.13e-93   NTclustered gi|11078065|gb|AF157178.1|AF157178 4850 g65529 i0 100 99.9895833333333 192 0 100 0 1 192 35 226 Blakeslea trispora 28S ribosomal RNA gene, partial sequence blastn 19198 355 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Blakeslea Blakeslea trispora
6731992 6731992 PRJNA1249042_S_NODE_117526_length_150_cov_1.345794_g117312_i0 PRJNA1249042 117526 150 1.345794 2.018691 Radiomyces spectabilis 64574 Fungi Fungi 139 9.12e-29   NTclustered gi|2323708324|ref|XM_051566874.1| 64574 g117312 i0 85.606 7.66 132 19 88 0 19 150 322 453 Radiomyces spectabilis 40S ribosomal protein S18 (BYT42DRAFT_557287), partial mRNA blastn 1149 139 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
11832885 11832885 PRJNA1249042_S_NODE_21230_length_261_cov_1.899083_g21016_i0 PRJNA1249042 21230 261 1.899083 4.95660663 Halteromyces radiatus 101107 Fungi Fungi 150 8.2e-32   NTclustered gi|2323722226|ref|XM_051544598.1| 101107 g21016 i0 79.111 2.08812260536398 225 41 85 6 40 261 423 202 Halteromyces radiatus 40S ribosomal protein S16 (BX664DRAFT_328416), partial mRNA blastn 545 150 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;