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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA1249042" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 19 ✖

bioproject 1

  • PRJNA1249042 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
354644 354644 PRJNA1249042_S_NODE_75361_length_182_cov_2.258993_g75147_i0 PRJNA1249042 75361 182 2.258993 4.11136726 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.004   NTclustered gi|1995060321|gb|MN450069.1| 12164 g75147 i0 100 0.774725274725275 29 0 16 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
2905181 2905181 PRJNA1249042_S_NODE_30743_length_240_cov_1.629442_g30529_i0 PRJNA1249042 30743 240 1.629442 3.9106608 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g30529 i0 100 0.616666666666667 29 0 12 0 212 240 41 13 Carnation latent virus isolate KL, complete genome blastn 148 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
2905188 2905188 PRJNA1249042_S_NODE_31883_length_238_cov_1.087179_g31669_i0 PRJNA1249042 31883 238 1.087179 2.58748602 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.006   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g31669 i0 100 0.239495798319328 29 0 12 0 210 238 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
4181947 4181947 PRJNA1249042_S_NODE_78904_length_179_cov_1.470588_g78690_i0 PRJNA1249042 78904 179 1.470588 2.63235252 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.004   NTclustered gi|1995060321|gb|MN450069.1| 12164 g78690 i0 100 0.787709497206704 29 0 16 0 151 179 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
5458069 5458069 PRJNA1249042_S_NODE_64125_length_193_cov_3.853333_g63911_i0 PRJNA1249042 64125 193 3.853333 7.43693269 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g63911 i0 100 0.295336787564767 29 0 15 0 165 193 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
8007551 8007551 PRJNA1249042_S_NODE_10707_length_303_cov_5.111538_g10493_i0 PRJNA1249042 10707 303 5.111538 15.48796014 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.008   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g10493 i0 100 0.188118811881188 29 0 10 0 275 303 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
10558610 10558610 PRJNA1249042_S_NODE_43569_length_219_cov_1.329545_g43355_i0 PRJNA1249042 43569 219 1.329545 2.91170355 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g43355 i0 100 0.26027397260274 29 0 13 0 191 219 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
14383255 14383255 PRJNA1249042_S_NODE_101192_length_160_cov_3.000000_g100978_i0 PRJNA1249042 101192 160 3 4.8 Botrytimonavirus botrytidis 2843870 Viruses Viruses 52.8 0.013   NTclustered gi|2500379340|ref|NC_076491.1| 2731253 g100978 i0 100 0.175 28 0 18 0 63 90 315 342 Botrytis cinerea negative-stranded RNA virus 7 isolate BCS13_DN1 hypothetical protein (QKO64_gp1), RNA-dependent RNA polymerase (QKO64_gp2), hypothetical protein (QKO64_gp3), and hypothetical protein (QKO64_gp4) genes, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Mymonaviridae Botrytimonavirus Botrytimonavirus botrytidis
16931889 16931889 PRJNA1249042_S_NODE_60194_length_198_cov_1.516129_g59980_i0 PRJNA1249042 60194 198 1.516129 3.00193542 Porcine bastrovirus 2588662 Viruses Viruses 52.8 0.017   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g59980 i0 100 0.141414141414141 28 0 14 0 1 28 15 42 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
18206267 18206267 PRJNA1249042_S_NODE_46215_length_215_cov_1.982558_g46001_i0 PRJNA1249042 46215 215 1.982558 4.2624997 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g46001 i0 100 0.265116279069767 29 0 13 0 187 215 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
18206484 18206484 PRJNA1249042_S_NODE_74535_length_183_cov_1.700000_g74321_i0 PRJNA1249042 74535 183 1.7 3.111 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.001   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g74321 i0 100 0.316939890710383 30 0 16 0 154 183 42 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
20756139 20756139 PRJNA1249042_S_NODE_54237_length_205_cov_1.358025_g54023_i0 PRJNA1249042 54237 205 1.358025 2.78395125 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g54023 i0 100 0.278048780487805 29 0 14 0 177 205 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
22031183 22031183 PRJNA1249042_S_NODE_36218_length_230_cov_2.192513_g36004_i0 PRJNA1249042 36218 230 2.192513 5.0427799 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.006   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g36004 i0 100 0.247826086956522 29 0 13 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
23306839 23306839 PRJNA1249042_S_NODE_41079_length_222_cov_2.932961_g40865_i0 PRJNA1249042 41079 222 2.932961 6.51117342 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g40865 i0 100 0.256756756756757 29 0 13 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
24004277 24004277 PRJNA1249042_S_NODE_5179_length_383_cov_10.302941_g4965_i0 PRJNA1249042 5179 383 10.302941 39.46026403 root 1 Root_unresolved Root_unresolved 54.7 0.01   NTclustered gi|1995060321|gb|MN450069.1| 12164 g4965 i0 100 0.793733681462141 29 0 15 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 304 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
24580643 24580643 PRJNA1249042_S_NODE_19080_length_267_cov_2.165179_g18866_i0 PRJNA1249042 19080 267 2.165179 5.78102793 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.007   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g18866 i0 100 0.213483146067416 29 0 11 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
24580754 24580754 PRJNA1249042_S_NODE_30760_length_240_cov_1.441624_g30546_i0 PRJNA1249042 30760 240 1.441624 3.4598976 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.006   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g30546 i0 100 0.2375 29 0 12 0 212 240 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
24580774 24580774 PRJNA1249042_S_NODE_3320_length_488_cov_11.541573_g3111_i0 PRJNA1249042 3320 488 11.541573 56.32287624 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 647 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g3111 i0 90.852 0.985655737704918 481 42 99 1 1 481 6630 7108 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 481 647 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
24581133 24581133 PRJNA1249042_S_NODE_74840_length_183_cov_1.157143_g74626_i0 PRJNA1249042 74840 183 1.157143 2.11757169 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.004   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g74626 i0 96.875 0.327868852459016 32 1 17 0 152 183 44 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 60 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;