contig_metadata
46 rows where analysis = "blastn", bioproject = "PRJNA1248471" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 353501 | 353501 | PRJNA1248471_S_NODE_601_length_456_cov_2.054054_g528_i0 | PRJNA1248471 | 601 | 456 | 2.054054 | 9.36648624 | uncultured beta proteobacterium CBNPD1 BAC clone 578 | 417305 | Bacteria | Bacteria | 675 | 0 | NTclustered | gi|121281912|gb|EF157669.1| | 417305 | g528 | i0 | 93.29 | 404.828947368421 | 462 | 24 | 99 | 4 | 2 | 456 | 12461 | 12922 | Uncultured beta proteobacterium CBNPD1 BAC clone 578 genomic sequence | blastn | 184602 | 675 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | uncultured beta proteobacterium CBNPD1 BAC clone 578 | |||||
| 1051960 | 1051960 | PRJNA1248471_S_NODE_16641_length_173_cov_1.370968_g16541_i0 | PRJNA1248471 | 16641 | 173 | 1.370968 | 2.37177464 | Chromobacteriaceae | 1499392 | Bacteria | Bacteria | 315 | 1.68e-81 | NTclustered | gi|1435238860|dbj|AP018823.1| | 332411 | g16541 | i0 | 99.422 | 527.017341040462 | 173 | 1 | 100 | 0 | 1 | 173 | 607570 | 607398 | Aquitalea magnusonii H3 DNA, complete genome | blastn | 91174 | 315 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Aquitalea | Aquitalea magnusonii | ||
| 1628297 | 1628297 | PRJNA1248471_S_NODE_12782_length_191_cov_1.436620_g12682_i0 | PRJNA1248471 | 12782 | 191 | 1.43662 | 2.7439442 | Caldimonas aquatica | 376175 | Bacteria | Bacteria | 333 | 5.239999999999999e-87 | NTclustered | gi|2325778792|gb|CP110257.1| | 376175 | g12682 | i0 | 100 | 176.460732984293 | 180 | 0 | 94 | 0 | 12 | 191 | 2126383 | 2126562 | Caldimonas aquatica strain LMG 23380 chromosome, complete genome | blastn | 33704 | 333 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Caldimonas | Caldimonas aquatica | ||
| 1628433 | 1628433 | PRJNA1248471_S_NODE_5842_length_240_cov_479.921466_g5742_i0 | PRJNA1248471 | 5842 | 240 | 479.921466 | 1151.8115184 | Escherichia coli | 562 | Bacteria | Bacteria | 82.4 | 2.75e-11 | NTclustered | gi|2483164521|gb|CP121294.1| | 3038394 | g5742 | i0 | 100 | 37.1 | 44 | 0 | 18 | 0 | 118 | 161 | 4801854 | 4801811 | Escherichia coli O155:H21 strain NWU_1 chromosome, complete genome | blastn | 8904 | 82.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2327380 | 2327380 | PRJNA1248471_S_NODE_382_length_510_cov_2.268980_g345_i0 | PRJNA1248471 | 382 | 510 | 2.26898 | 11.571798 | Acinetobacter | 469 | Bacteria | Bacteria | 427 | 7.1e-115 | NTclustered | gi|1015847076|gb|CP015110.1| | 1407071 | g345 | i0 | 97.59 | 654.772549019608 | 249 | 6 | 96 | 0 | 262 | 510 | 26525 | 26773 | Acinetobacter sp. TGL-Y2, complete genome | blastn | 333934 | 427 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter sp. TGL-Y2 | ||
| 2904515 | 2904515 | PRJNA1248471_S_NODE_7743_length_218_cov_2.603550_g7643_i0 | PRJNA1248471 | 7743 | 218 | 2.60355 | 5.675739 | Sphingomonas paucimobilis | 13689 | Bacteria | Bacteria | 303 | 4.82e-78 | NTclustered | gi|1943313950|gb|CP065713.1| | 13689 | g7643 | i0 | 91.743 | 21.6467889908257 | 218 | 18 | 100 | 0 | 1 | 218 | 2409233 | 2409450 | Sphingomonas paucimobilis strain FDAARGOS_881 chromosome, complete genome | blastn | 4719 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas paucimobilis | ||
| 3602511 | 3602511 | PRJNA1248471_S_NODE_663_length_443_cov_3.012690_g587_i0 | PRJNA1248471 | 663 | 443 | 3.01269 | 13.3462167 | Acinetobacter | 469 | Bacteria | Bacteria | 808 | 0 | NTclustered | gi|1751391443|gb|CP019143.2| | 28090 | g587 | i0 | 99.549 | 665.977426636569 | 443 | 2 | 100 | 0 | 1 | 443 | 28174 | 28616 | Acinetobacter lwoffii strain ZS207 chromosome, complete genome | blastn | 295028 | 808 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter lwoffii | ||
| 5457066 | 5457066 | PRJNA1248471_S_NODE_4325_length_267_cov_1.940367_g4225_i0 | PRJNA1248471 | 4325 | 267 | 1.940367 | 5.18077989 | Sphingomonas paucimobilis | 13689 | Bacteria | Bacteria | 405 | 1.63e-108 | NTclustered | gi|1943313950|gb|CP065713.1| | 13689 | g4225 | i0 | 94.007 | 5.23970037453183 | 267 | 16 | 100 | 0 | 1 | 267 | 2409468 | 2409734 | Sphingomonas paucimobilis strain FDAARGOS_881 chromosome, complete genome | blastn | 1399 | 405 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas paucimobilis | ||
| 6154734 | 6154734 | PRJNA1248471_S_NODE_11985_length_195_cov_1.541096_g11885_i0 | PRJNA1248471 | 11985 | 195 | 1.541096 | 3.0051372 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 309 | 9.06e-80 | NTclustered | gi|2204876709|gb|CP049334.1| | 964 | g11885 | i0 | 95.385 | 307.497435897436 | 195 | 8 | 100 | 1 | 1 | 195 | 522340 | 522533 | Herbaspirillum seropedicae strain Z69 chromosome | blastn | 59962 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum seropedicae | ||
| 6154736 | 6154736 | PRJNA1248471_S_NODE_14085_length_184_cov_1.133333_g13985_i0 | PRJNA1248471 | 14085 | 184 | 1.133333 | 2.08533272 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 320 | 3.9e-83 | NTclustered | gi|1861348618|gb|CP049828.1| | 29581 | g13985 | i0 | 98.352 | 489.853260869565 | 182 | 3 | 99 | 0 | 3 | 184 | 1038126 | 1038307 | Janthinobacterium lividum strain EIF2 chromosome, complete genome | blastn | 90133 | 320 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Janthinobacterium | Janthinobacterium lividum | ||
| 6154754 | 6154754 | PRJNA1248471_S_NODE_3745_length_282_cov_1.948498_g3645_i0 | PRJNA1248471 | 3745 | 282 | 1.948498 | 5.49476436 | root | 1 | Root_unresolved | Root_unresolved | 368 | 2.27e-97 | NTclustered | gi|2456158263|gb|CP119200.1| | 40214 | g3645 | i0 | 91.985 | 643.81914893617 | 262 | 21 | 93 | 0 | 21 | 282 | 166448 | 166709 | Acinetobacter johnsonii strain AJ572 chromosome, complete genome | blastn | 181557 | 368 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 6154758 | 6154758 | PRJNA1248471_S_NODE_4685_length_260_cov_1.369668_g4585_i0 | PRJNA1248471 | 4685 | 260 | 1.369668 | 3.5611368 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 381 | 2.659999999999999e-101 | NTclustered | gi|2703326990|gb|CP148752.1| | 294 | g4585 | i0 | 100 | 431.038461538462 | 206 | 0 | 79 | 0 | 41 | 246 | 113534 | 113329 | Pseudomonas fluorescens strain AB1 chromosome, complete genome | blastn | 112070 | 381 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 6731328 | 6731328 | PRJNA1248471_S_NODE_14826_length_180_cov_2.335878_g14726_i0 | PRJNA1248471 | 14826 | 180 | 2.335878 | 4.2045804 | Serratia surfactantfaciens | 2741499 | Bacteria | Bacteria | 313 | 6.34e-81 | NTclustered | gi|1057963632|gb|CP016948.1| | 2741499 | g14726 | i0 | 100 | 93.8888888888889 | 169 | 0 | 94 | 0 | 1 | 169 | 1378349 | 1378181 | Serratia surfactantfaciens strain YD25 chromosome, complete genome | blastn | 16900 | 313 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Serratia | Serratia surfactantfaciens | ||
| 8006943 | 8006943 | PRJNA1248471_S_NODE_14227_length_183_cov_1.902985_g14127_i0 | PRJNA1248471 | 14227 | 183 | 1.902985 | 3.48246255 | Nevskia ramosa | 64002 | Bacteria | Bacteria | 278 | 2.36e-70 | NTclustered | gi|1004607053|gb|KT865761.1| | 64002 | g14127 | i0 | 94.022 | 386.338797814208 | 184 | 9 | 100 | 2 | 1 | 183 | 791 | 973 | Nevskia ramosa strain DSM 11499 23S ribosomal RNA gene, partial sequence | blastn | 70700 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Nevskia | Nevskia ramosa | ||
| 8007016 | 8007016 | PRJNA1248471_S_NODE_22567_length_161_cov_0.910714_g22467_i0 | PRJNA1248471 | 22567 | 161 | 0.910714 | 1.46624954 | Aquitalea sp. USM4 | 1590041 | Bacteria | Bacteria | 174 | 2.74e-39 | NTclustered | gi|1586132239|gb|CP029539.1| | 1590041 | g22467 | i0 | 100 | 0.583850931677019 | 94 | 0 | 58 | 0 | 1 | 94 | 2280104 | 2280197 | Aquitalea sp. USM4 chromosome, complete genome | blastn | 94 | 174 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Aquitalea | Aquitalea sp. USM4 | ||
| 8704779 | 8704779 | PRJNA1248471_S_NODE_13147_length_189_cov_1.450000_g13047_i0 | PRJNA1248471 | 13147 | 189 | 1.45 | 2.7405 | root | 1 | Root_unresolved | Root_unresolved | 322 | 1.12e-83 | NTclustered | gi|2160204256|gb|CP088081.1| | 36863 | g13047 | i0 | 97.354 | 164.624338624339 | 189 | 5 | 100 | 0 | 1 | 189 | 589763 | 589575 | Ideonella dechloratans strain CCUG 30977 chromosome, complete genome | blastn | 31114 | 322 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Ideonella | Ideonella dechloratans | ||
| 8704791 | 8704791 | PRJNA1248471_S_NODE_16887_length_172_cov_1.821138_g16787_i0 | PRJNA1248471 | 16887 | 172 | 1.821138 | 3.13235736 | Comamonadaceae | 80864 | Bacteria | Bacteria | 318 | 1.2899999999999999e-82 | NTclustered | gi|1885879519|gb|CP043568.1| | 285 | g16787 | i0 | 100 | 377.017441860465 | 172 | 0 | 100 | 0 | 1 | 172 | 594259 | 594430 | Comamonas testosteroni strain T5-67 chromosome, complete genome | blastn | 64847 | 318 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas testosteroni | ||
| 10557779 | 10557779 | PRJNA1248471_S_NODE_3349_length_293_cov_2.209016_g3249_i0 | PRJNA1248471 | 3349 | 293 | 2.209016 | 6.47241688 | Roseomonas cutis | 2897332 | Bacteria | Bacteria | 309 | 1.4600000000000003e-79 | NTclustered | gi|2156612837|gb|CP087719.1| | 2897332 | g3249 | i0 | 85.906 | 272.22866894198 | 298 | 32 | 100 | 9 | 1 | 293 | 1258995 | 1258703 | Roseomonas cutis strain OT10 chromosome, complete genome | blastn | 79763 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Roseomonadaceae | Roseomonas | Roseomonas cutis | ||
| 13805393 | 13805393 | PRJNA1248471_S_NODE_6851_length_229_cov_5.011111_g6751_i0 | PRJNA1248471 | 6851 | 229 | 5.011111 | 11.47544419 | root | 1 | Root_unresolved | Root_unresolved | 82.4 | 2.61e-11 | NTclustered | gi|2495211004|gb|CP123010.1| | 562 | g6751 | i0 | 100 | 39.471615720524 | 44 | 0 | 33 | 0 | 186 | 229 | 4945005 | 4945048 | Escherichia coli strain K4 substr. NWU_2 chromosome, complete genome | blastn | 9039 | 82.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 13805402 | 13805402 | PRJNA1248471_S_NODE_8871_length_209_cov_2.000000_g8771_i0 | PRJNA1248471 | 8871 | 209 | 2 | 4.18 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 370 | 4.45e-98 | NTclustered | gi|1050282212|gb|CP016756.1| | 83617 | g8771 | i0 | 98.565 | 206.971291866029 | 209 | 3 | 100 | 0 | 1 | 209 | 1855942 | 1856150 | Stenotrophomonas nitritireducens strain 2001, complete genome | blastn | 43257 | 370 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas nitritireducens | ||
| 14382720 | 14382720 | PRJNA1248471_S_NODE_16412_length_174_cov_1.128000_g16312_i0 | PRJNA1248471 | 16412 | 174 | 1.128 | 1.96272 | Candidatus Sphingomonas colombiensis | 3121369 | Bacteria | Bacteria | 305 | 1.02e-78 | NTclustered | gi|2457531060|gb|CP119315.1| | 3121369 | g16312 | i0 | 98.276 | 174.591954022989 | 174 | 3 | 100 | 0 | 1 | 174 | 2120 | 1947 | MAG: Candidatus Sphingomonas colombiensis isolate MAG_27 chromosome, complete genome | blastn | 30379 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Candidatus Sphingomonas colombiensis | ||
| 14382723 | 14382723 | PRJNA1248471_S_NODE_16832_length_172_cov_3.682927_g16732_i0 | PRJNA1248471 | 16832 | 172 | 3.682927 | 6.33463444 | Pseudomonas sp. C27(2019) | 2604941 | Bacteria | Bacteria | 267 | 4.73e-67 | NTclustered | gi|1755685660|gb|CP043320.1| | 2604941 | g16732 | i0 | 96.296 | 349.75 | 162 | 6 | 96 | 0 | 4 | 165 | 352803 | 352642 | Pseudomonas sp. C27(2019) chromosome, complete genome | blastn | 60157 | 267 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. C27(2019) | ||
| 15079577 | 15079577 | PRJNA1248471_S_NODE_12712_length_191_cov_3.126761_g12612_i0 | PRJNA1248471 | 12712 | 191 | 3.126761 | 5.97211351 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 327 | 2.44e-85 | NTclustered | gi|1050282212|gb|CP016756.1| | 83617 | g12612 | i0 | 100 | 202.026178010471 | 177 | 0 | 93 | 0 | 1 | 177 | 1854053 | 1854229 | Stenotrophomonas nitritireducens strain 2001, complete genome | blastn | 38587 | 327 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas nitritireducens | ||
| 15079589 | 15079589 | PRJNA1248471_S_NODE_20172_length_164_cov_2.982609_g20072_i0 | PRJNA1248471 | 20172 | 164 | 2.982609 | 4.89147876 | Lysobacteraceae | 32033 | Bacteria | Bacteria | 278 | 2.08e-70 | NTclustered | gi|261865330|gb|GU058921.1| | 343 | g20072 | i0 | 98.113 | 177.432926829268 | 159 | 3 | 97 | 0 | 6 | 164 | 576 | 734 | Xanthomonas translucens strain IPPBC 3321 clone 21-anti 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 29099 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Xanthomonas | Xanthomonas translucens | ||
| 15079614 | 15079614 | PRJNA1248471_S_NODE_7192_length_225_cov_2.176136_g7092_i0 | PRJNA1248471 | 7192 | 225 | 2.176136 | 4.896306 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 416 | 6.159999999999998e-112 | NTclustered | gi|2307904090|gb|CP104290.1| | 40324 | g7092 | i0 | 100 | 325.96 | 225 | 0 | 100 | 0 | 1 | 225 | 395844 | 396068 | Stenotrophomonas maltophilia strain ACYCa.6E chromosome, complete genome | blastn | 73341 | 416 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 15079618 | 15079618 | PRJNA1248471_S_NODE_832_length_414_cov_3.347945_g752_i0 | PRJNA1248471 | 832 | 414 | 3.347945 | 13.8604923 | Aquitalea | 407217 | Bacteria | Bacteria | 588 | 2.4499999999999998e-163 | NTclustered | gi|1795645824|gb|CP047241.1| | 519081 | g752 | i0 | 100 | 96.9323671497584 | 318 | 0 | 77 | 0 | 1 | 318 | 612250 | 611933 | Aquitalea denitrificans strain 5YN1-3 chromosome, complete genome | blastn | 40130 | 588 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Aquitalea | Aquitalea denitrificans | ||
| 15656518 | 15656518 | PRJNA1248471_S_NODE_11793_length_196_cov_1.272109_g11693_i0 | PRJNA1248471 | 11793 | 196 | 1.272109 | 2.49333364 | Serratia surfactantfaciens | 2741499 | Bacteria | Bacteria | 363 | 6.899999999999998e-96 | NTclustered | gi|1057963632|gb|CP016948.1| | 2741499 | g11693 | i0 | 100 | 100 | 196 | 0 | 100 | 0 | 1 | 196 | 855537 | 855342 | Serratia surfactantfaciens strain YD25 chromosome, complete genome | blastn | 19600 | 363 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Serratia | Serratia surfactantfaciens | ||
| 16354449 | 16354449 | PRJNA1248471_S_NODE_3973_length_276_cov_2.925110_g3873_i0 | PRJNA1248471 | 3973 | 276 | 2.92511 | 8.0733036 | Delftia | 80865 | Bacteria | Bacteria | 372 | 1.72e-98 | NTclustered | gi|1134452940|gb|CP019171.1| | 80866 | g3873 | i0 | 91.007 | 274.25 | 278 | 21 | 100 | 4 | 1 | 276 | 766713 | 766438 | Delftia acidovorans isolate ANG1, complete genome | blastn | 75693 | 372 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | Delftia acidovorans | ||
| 16354460 | 16354460 | PRJNA1248471_S_NODE_7833_length_217_cov_2.648810_g7733_i0 | PRJNA1248471 | 7833 | 217 | 2.64881 | 5.7479177 | Pseudomonas | 286 | Bacteria | Bacteria | 370 | 4.659999999999999e-98 | NTclustered | gi|984710213|gb|CP014135.1| | 46677 | g7733 | i0 | 100 | 467.304147465438 | 200 | 0 | 92 | 0 | 1 | 200 | 25424 | 25623 | Pseudomonas agarici strain NCPPB 2472 genome | blastn | 101405 | 370 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas agarici | ||
| 16930918 | 16930918 | PRJNA1248471_S_NODE_4994_length_254_cov_1.526829_g4894_i0 | PRJNA1248471 | 4994 | 254 | 1.526829 | 3.87814566 | Sphingomonas sp. FARSPH | 2219696 | Bacteria | Bacteria | 298 | 2.68e-76 | NTclustered | gi|1441477124|gb|CP029985.1| | 2219696 | g4894 | i0 | 95.263 | 159.759842519685 | 190 | 6 | 74 | 3 | 67 | 254 | 1040272 | 1040460 | Sphingomonas sp. FARSPH chromosome, complete genome | blastn | 40579 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. FARSPH | ||
| 16930932 | 16930932 | PRJNA1248471_S_NODE_6934_length_228_cov_2.648045_g6834_i0 | PRJNA1248471 | 6934 | 228 | 2.648045 | 6.0375426 | Aquincola tertiaricarbonis | 391953 | Bacteria | Bacteria | 381 | 2.2799999999999994e-101 | NTclustered | gi|2246256535|gb|CP097636.1| | 391953 | g6834 | i0 | 98.165 | 155.75 | 218 | 4 | 96 | 0 | 11 | 228 | 501114 | 500897 | Aquincola tertiaricarbonis strain RN12 chromosome 2, complete sequence | blastn | 35511 | 381 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Aquincola | Aquincola tertiaricarbonis | ||
| 17629749 | 17629749 | PRJNA1248471_S_NODE_25054_length_151_cov_2.960784_g24954_i0 | PRJNA1248471 | 25054 | 151 | 2.960784 | 4.47078384 | Pseudoxanthomonas | 83618 | Bacteria | Bacteria | 261 | 1.88e-65 | NTclustered | gi|2801066059|gb|CP169056.1| | 266061 | g24954 | i0 | 98.013 | 258.635761589404 | 151 | 2 | 100 | 1 | 1 | 151 | 2781396 | 2781247 | Pseudoxanthomonas koreensis strain TDY-1 chromosome, complete genome | blastn | 39054 | 261 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Pseudoxanthomonas | Pseudoxanthomonas koreensis | ||
| 18903514 | 18903514 | PRJNA1248471_S_NODE_6735_length_230_cov_372.541436_g6635_i0 | PRJNA1248471 | 6735 | 230 | 372.541436 | 856.8453028 | root | 1 | Root_unresolved | Root_unresolved | 67.6 | 7.33e-7 | NTclustered | gi|2495211004|gb|CP123010.1| | 562 | g6635 | i0 | 100 | 14.6608695652174 | 36 | 0 | 17 | 0 | 179 | 214 | 4945047 | 4945012 | Escherichia coli strain K4 substr. NWU_2 chromosome, complete genome | blastn | 3372 | 67.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 19479722 | 19479722 | PRJNA1248471_S_NODE_6816_length_230_cov_0.861878_g6716_i0 | PRJNA1248471 | 6816 | 230 | 0.861878 | 1.9823194 | Acinetobacter variabilis | 70346 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2551118531|gb|CP130328.1| | 70346 | g6716 | i0 | 100 | 0.126086956521739 | 29 | 0 | 13 | 0 | 113 | 141 | 124798 | 124826 | Acinetobacter variabilis strain TB2-2B chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter variabilis | ||
| 19479735 | 19479735 | PRJNA1248471_S_NODE_7956_length_216_cov_1.479042_g7856_i0 | PRJNA1248471 | 7956 | 216 | 1.479042 | 3.19473072 | Bradyrhizobium sp. STM 3557 | 578920 | Bacteria | Bacteria | 263 | 8.089999999999999e-66 | NTclustered | gi|2863802597|gb|CP120697.1| | 578920 | g7856 | i0 | 99.31 | 72.5 | 145 | 1 | 67 | 0 | 58 | 202 | 1584973 | 1585117 | Bradyrhizobium sp. STM 3557 chromosome, complete genome | blastn | 15660 | 263 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. STM 3557 | ||
| 20755172 | 20755172 | PRJNA1248471_S_NODE_5157_length_251_cov_1.980198_g5057_i0 | PRJNA1248471 | 5157 | 251 | 1.980198 | 4.97029698 | Methylobacterium radiodurans | 2202828 | Bacteria | Bacteria | 126 | 1.32e-24 | NTclustered | gi|1393171907|gb|CP029551.1| | 2202828 | g5057 | i0 | 78.14 | 13.8207171314741 | 215 | 35 | 83 | 12 | 14 | 222 | 25114 | 24906 | Methylobacterium radiodurans strain 17Sr1-43 chromosome, complete genome | blastn | 3469 | 126 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiodurans | ||
| 21453822 | 21453822 | PRJNA1248471_S_NODE_17737_length_169_cov_2.266667_g17637_i0 | PRJNA1248471 | 17737 | 169 | 2.266667 | 3.83066723 | Pseudomonas | 286 | Bacteria | Bacteria | 303 | 3.53e-78 | NTclustered | gi|646237114|gb|CP007638.1| | 1495331 | g17637 | i0 | 99.401 | 98.396449704142 | 167 | 1 | 99 | 0 | 3 | 169 | 3558759 | 3558925 | Pseudomonas sp. WCS374 genome | blastn | 16629 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. WCS374 | ||
| 22030275 | 22030275 | PRJNA1248471_S_NODE_11378_length_198_cov_1.328859_g11278_i0 | PRJNA1248471 | 11378 | 198 | 1.328859 | 2.63114082 | Buchnera aphidicola | 9 | Bacteria | Bacteria | 287 | 4.32e-73 | NTclustered | gi|1387110550|gb|CP029161.1| | 2173854 | g11278 | i0 | 94.624 | 169.656565656566 | 186 | 9 | 94 | 1 | 13 | 198 | 94691 | 94875 | Buchnera aphidicola (Melanaphis sacchari) strain LSU chromosome, complete genome | blastn | 33592 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Buchnera | Buchnera aphidicola | ||
| 22030349 | 22030349 | PRJNA1248471_S_NODE_18518_length_167_cov_1.135593_g18418_i0 | PRJNA1248471 | 18518 | 167 | 1.135593 | 1.89644031 | Buchnera aphidicola | 9 | Bacteria | Bacteria | 298 | 1.63e-76 | NTclustered | gi|1631841601|gb|CP034864.1| | 1241865 | g18418 | i0 | 98.802 | 100.658682634731 | 167 | 2 | 100 | 0 | 1 | 167 | 524033 | 523867 | Buchnera aphidicola (Macrosiphoniella sanborni) strain Msa chromosome | blastn | 16810 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Buchnera | Buchnera aphidicola | ||
| 22030424 | 22030424 | PRJNA1248471_S_NODE_5398_length_247_cov_2.661616_g5298_i0 | PRJNA1248471 | 5398 | 247 | 2.661616 | 6.57419152 | Buchnera aphidicola | 9 | Bacteria | Bacteria | 289 | 1.56e-73 | NTclustered | gi|1824609601|gb|CP048747.1| | 2708354 | g5298 | i0 | 87.698 | 34.7651821862348 | 252 | 25 | 99 | 3 | 2 | 247 | 92900 | 93151 | Buchnera aphidicola (Microlophium carnosum) isolate MCAR-56B chromosome, complete genome | blastn | 8587 | 289 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Buchnera | Buchnera aphidicola | ||
| 22728861 | 22728861 | PRJNA1248471_S_NODE_5898_length_240_cov_1.890052_g5798_i0 | PRJNA1248471 | 5898 | 240 | 1.890052 | 4.5361248 | Comamonas | 283 | Bacteria | Bacteria | 372 | 1.4599999999999997e-98 | NTclustered | gi|1049746289|gb|CP016603.1| | 225991 | g5798 | i0 | 94.583 | 447.05 | 240 | 13 | 100 | 0 | 1 | 240 | 602499 | 602260 | Comamonas aquatica strain CJG genome | blastn | 107292 | 372 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas aquatica | ||
| 24579895 | 24579895 | PRJNA1248471_S_NODE_11960_length_195_cov_2.095890_g11860_i0 | PRJNA1248471 | 11960 | 195 | 2.09589 | 4.0869855 | Bradyrhizobium sp. 200 | 2782665 | Bacteria | Bacteria | 305 | 1.17e-78 | NTclustered | gi|2230082655|gb|CP064689.1| | 2782665 | g11860 | i0 | 94.872 | 99.9692307692308 | 195 | 10 | 100 | 0 | 1 | 195 | 3033036 | 3032842 | Bradyrhizobium sp. 200 chromosome, complete genome | blastn | 19494 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. 200 | ||
| 24579985 | 24579985 | PRJNA1248471_S_NODE_20880_length_163_cov_2.096491_g20780_i0 | PRJNA1248471 | 20880 | 163 | 2.096491 | 3.41728033 | Herbaspirillum huttiense | 863372 | Bacteria | Bacteria | 246 | 5.8099999999999995e-61 | NTclustered | gi|2294984499|gb|CP103872.1| | 863372 | g20780 | i0 | 96.622 | 2.71165644171779 | 148 | 5 | 91 | 0 | 1 | 148 | 497111 | 497258 | Herbaspirillum huttiense strain ZXN111 chromosome, complete genome | blastn | 442 | 246 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum huttiense | ||
| 24580001 | 24580001 | PRJNA1248471_S_NODE_24520_length_155_cov_2.122642_g24420_i0 | PRJNA1248471 | 24520 | 155 | 2.122642 | 3.2900951 | Serratia surfactantfaciens | 2741499 | Bacteria | Bacteria | 281 | 1.49e-71 | NTclustered | gi|1057963632|gb|CP016948.1| | 2741499 | g24420 | i0 | 99.355 | 100 | 155 | 1 | 100 | 0 | 1 | 155 | 4267437 | 4267283 | Serratia surfactantfaciens strain YD25 chromosome, complete genome | blastn | 15500 | 281 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Serratia | Serratia surfactantfaciens | ||
| 24580003 | 24580003 | PRJNA1248471_S_NODE_2500_length_313_cov_2.465909_g2400_i0 | PRJNA1248471 | 2500 | 313 | 2.465909 | 7.71829517 | Aquitalea sp. USM4 | 1590041 | Bacteria | Bacteria | 490 | 5.24e-134 | NTclustered | gi|1586132239|gb|CP029539.1| | 1590041 | g2400 | i0 | 100 | 424.635782747604 | 265 | 0 | 99 | 0 | 1 | 265 | 1097244 | 1097508 | Aquitalea sp. USM4 chromosome, complete genome | blastn | 132911 | 490 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Aquitalea | Aquitalea sp. USM4 | ||
| 24580016 | 24580016 | PRJNA1248471_S_NODE_2900_length_304_cov_3.584314_g2800_i0 | PRJNA1248471 | 2900 | 304 | 3.584314 | 10.89631456 | Undibacterium sp. YM2 | 2058625 | Bacteria | Bacteria | 473 | 5.1e-129 | NTclustered | gi|1798099803|dbj|AP018441.1| | 2058625 | g2800 | i0 | 94.737 | 398.003289473684 | 304 | 16 | 100 | 0 | 1 | 304 | 1529622 | 1529319 | Undibacterium sp. YM2 DNA, complete genome | blastn | 120993 | 473 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium sp. YM2 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;