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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1248471" and tax_clade = "Sar"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA1248471 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4180745 4180745 PRJNA1248471_S_NODE_13124_length_189_cov_1.642857_g13024_i0 PRJNA1248471 13124 189 1.642857 3.10499973 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 108 3.41e-19   NTclustered gi|820695469|tpe|LN714488.1| 572307 g13024 i0 83.761 10.7089947089947 117 15 62 4 2 117 80571 80458 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 2024 108 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
6731356 6731356 PRJNA1248471_S_NODE_17686_length_169_cov_3.783333_g17586_i0 PRJNA1248471 17686 169 3.783333 6.39383277 uncultured stramenopile 152704 SAR_Eukaryotes SAR_Eukaryotes 307 2.73e-79   NTclustered gi|291495474|gb|GU823101.1| 152704 g17586 i0 99.408 100 169 1 100 0 1 169 399 567 Uncultured stramenopile clone A93F14RM2B11 18S ribosomal RNA gene, partial sequence blastn 16900 307 1 Eukaryota Sar             uncultured stramenopile
7429917 7429917 PRJNA1248471_S_NODE_3926_length_277_cov_4.289474_g3826_i0 PRJNA1248471 3926 277 4.289474 11.88184298 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 507 4.53e-139   NTclustered gi|14495562|gb|L21708.2|PFA34K 5821 g3826 i0 99.639 100 277 1 100 0 1 277 1191 915 Plasmodium berghei p23-like protein mRNA, partial cds blastn 27700 512 0.990234375 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
8007009 8007009 PRJNA1248471_S_NODE_21787_length_162_cov_0.920354_g21687_i0 PRJNA1248471 21787 162 0.920354 1.49097348 uncultured diatom 137771 SAR_Eukaryotes SAR_Eukaryotes 126 7.83e-25   NTclustered gi|60687350|gb|AY821977.1| 137771 g21687 i0 92.135 6.11111111111111 89 7 55 0 72 160 381 469 Uncultured diatom clone CV1_B2_82 small subunit ribosomal RNA gene, partial sequence blastn 990 126 1 Eukaryota Sar   Bacillariophyta         uncultured diatom
10557666 10557666 PRJNA1248471_S_NODE_12449_length_193_cov_0.680556_g12349_i0 PRJNA1248471 12449 193 0.680556 1.31347308 Ostreopsis sp. s0661 1094658 SAR_Eukaryotes SAR_Eukaryotes 137 4.47e-28   NTclustered gi|359385670|dbj|AB674848.1| 1094658 g12349 i0 85.075 2.70466321243523 134 20 69 0 1 134 306 439 Ostreopsis sp. s0661 gene for 28S ribosomal RNA, partial sequence blastn 522 137 1 Eukaryota Sar     Dinophyceae Peridiniales Ostreopsidaceae Ostreopsis Ostreopsis sp. s0661
11832184 11832184 PRJNA1248471_S_NODE_18250_length_168_cov_0.739496_g18150_i0 PRJNA1248471 18250 168 0.739496 1.24235328 Theileria equi 5872 SAR_Eukaryotes SAR_Eukaryotes 65.8 1.81e-6   NTclustered gi|2047401816|gb|MZ327268.1| 5872 g18150 i0 93.182 2.64285714285714 44 3 26 0 1 44 178 135 Theileria equi voucher GZ-6 small subunit ribosomal RNA gene, partial sequence blastn 444 65.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
15079576 15079576 PRJNA1248471_S_NODE_12552_length_192_cov_1.832168_g12452_i0 PRJNA1248471 12552 192 1.832168 3.51776256 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 355 1.13e-93   NTclustered gi|27262897|emb|Y10566.2| 92081 g12452 i0 100 100 192 0 100 0 1 192 755 946 Peridinium balticum endosymbiont partial 18S rRNA gene blastn 19200 355 1 Eukaryota Sar   Bacillariophyta         Peridinium balticum endosymbiont

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;