RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1248424" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1248424 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8006693 8006693 PRJNA1248424_P_NODE_75907_length_245_cov_0.895349_g69838_i0 PRJNA1248424 75907 245 0.895349 2.19360505 Acanthaster planci 133434 Echinodermata other_Eukaryota 56.5 0.002   NTclustered gi|1229155072|ref|XM_022234527.1| 133434 g69838 i0 97.059 0.693877551020408 34 0 14 1 55 88 2254 2286 PREDICTED: Acanthaster planci tumor necrosis factor receptor superfamily member 1B-like (LOC110979049), transcript variant X3, mRNA blastn 170 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
9281560 9281560 PRJNA1248424_P_NODE_77908_length_243_cov_0.905882_g71839_i0 PRJNA1248424 77908 243 0.905882 2.20129326 Patiria miniata 46514 Echinodermata other_Eukaryota 449 6.65e-122   NTclustered gi|1944912312|ref|XM_038213035.1| 46514 g71839 i0 100 1 243 0 100 0 1 243 1076 834 PREDICTED: Patiria miniata uncharacterized LOC119738241 (LOC119738241), mRNA blastn 243 449 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;