RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1248424" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 4 ✖

bioproject 1

  • PRJNA1248424 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
352839 352839 PRJNA1248424_P_NODE_60521_length_274_cov_1.532338_g54453_i0 PRJNA1248424 60521 274 1.532338 4.19860612 Inoviridae sp. 2219103 Viruses Viruses 385 2.18e-102   NTclustered gi|2057837122|tpg|BK055650.1| 2219103 g54453 i0 91.971 5.97445255474453 274 22 100 0 1 274 5456 5729 MAG TPA_asm: Inoviridae sp. isolate ctphY2, partial genome blastn 1637 385 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
353137 353137 PRJNA1248424_P_NODE_75061_length_246_cov_0.890173_g68992_i0 PRJNA1248424 75061 246 0.890173 2.18982558 Inoviridae sp. 2219103 Viruses Viruses 444 3.14e-120   NTclustered gi|2052974669|tpg|BK030493.1| 2219103 g68992 i0 99.187 1 246 2 100 0 1 246 5599 5844 MAG TPA_asm: Inoviridae sp. isolate ctCBR15, partial genome blastn 246 444 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
18204897 18204897 PRJNA1248424_P_NODE_69995_length_250_cov_1.305085_g63926_i0 PRJNA1248424 69995 250 1.305085 3.2627125 Inoviridae sp. 2219103 Viruses Viruses 440 4.1399999999999976e-119   NTclustered gi|2052974669|tpg|BK030493.1| 2219103 g63926 i0 98.4 1 250 4 100 0 1 250 5201 4952 MAG TPA_asm: Inoviridae sp. isolate ctCBR15, partial genome blastn 250 440 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
22029710 22029710 PRJNA1248424_P_NODE_57638_length_282_cov_0.880383_g51570_i0 PRJNA1248424 57638 282 0.880383 2.48268006 Inoviridae sp. 2219103 Viruses Viruses 510 3.57e-140   NTclustered gi|2059739988|tpg|BK026415.1| 2219103 g51570 i0 99.291 2.99290780141844 282 2 100 0 1 282 8693 8974 MAG TPA_asm: Inoviridae sp. isolate ctWJB2, partial genome blastn 844 510 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;