RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1248424" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA1248424 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2903474 2903474 PRJNA1248424_P_NODE_42343_length_355_cov_1.624113_g36281_i0 PRJNA1248424 42343 355 1.624113 5.76560115 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.034   NTclustered gi|2794962931|ref|XM_067866326.1| 2049356 g36281 i0 100 0.0788732394366197 28 0 8 0 114 141 869 896 Monocercomonoides exilis uncharacterized protein (MONOS_1361), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
8005507 8005507 PRJNA1248424_P_NODE_22127_length_764_cov_2.390738_g16388_i0 PRJNA1248424 22127 764 2.390738 18.26523832 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 54.7 0.021   NTclustered gi|154420903|ref|XM_001583416.1| 412133 g16388 i0 100 0.0379581151832461 29 0 4 0 590 618 1085 1113 Trichomonas vaginalis G3 uncharacterized protein (TVAGG3_0811060), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;