RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1248424" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 7 ✖

bioproject 1

  • PRJNA1248424 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1627698 1627698 PRJNA1248424_P_NODE_58502_length_279_cov_2.325243_g52434_i0 PRJNA1248424 58502 279 2.325243 6.48742797 Nostoc sp. TCL240-02 2572090 Bacteria Bacteria 54.7 0.007   NTclustered gi|1854569723|gb|CP040094.1| 2572090 g52434 i0 100 0.204301075268817 29 0 10 0 247 275 3686208 3686236 Nostoc sp. TCL240-02 chromosome, complete genome blastn 57 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. TCL240-02
2327250 2327250 PRJNA1248424_P_NODE_52742_length_296_cov_1.251121_g46674_i0 PRJNA1248424 52742 296 1.251121 3.70331816 Nostoc 1177 Bacteria Bacteria 52.8 0.027   NTclustered gi|953508392|dbj|AP017295.1| 1751286 g46674 i0 100 0.189189189189189 28 0 9 0 217 244 4156477 4156504 Nostoc sp. NIES-3756 DNA, complete genome blastn 56 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. NIES-3756
5456547 5456547 PRJNA1248424_P_NODE_68225_length_253_cov_1.161111_g62156_i0 PRJNA1248424 68225 253 1.161111 2.93761083 Microcoleus vaginatus 119532 Bacteria Bacteria 300 7.43e-77   NTclustered gi|2212798032|gb|CP031740.1| 669365 g62156 i0 88.189 4.90909090909091 254 26 99 4 2 253 4415518 4415267 Microcoleus vaginatus PCC 9802 chromosome, complete genome blastn 1242 300 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Microcoleaceae Microcoleus Microcoleus vaginatus
10557318 10557318 PRJNA1248424_P_NODE_69469_length_251_cov_0.865169_g63400_i0 PRJNA1248424 69469 251 0.865169 2.17157419 Leptolyngbya sp. 7M 2812896 Bacteria Bacteria 272 1.6e-68   NTclustered gi|2028908486|gb|CP070897.1| 2812896 g63400 i0 89.72 120.892430278884 214 20 85 2 4 216 3681304 3681092 Leptolyngbya sp. 7M chromosome blastn 30344 272 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptolyngbya Leptolyngbya sp. 7M
14382239 14382239 PRJNA1248424_P_NODE_64732_length_262_cov_2.534392_g58663_i0 PRJNA1248424 64732 262 2.534392 6.64010704 Nostoc sp. UHCC 0702 2814655 Bacteria Bacteria 65.8 3.07e-6   NTclustered gi|1996588181|gb|CP071065.1| 2814655 g58663 i0 93.333 2.12595419847328 45 1 17 2 218 262 7141396 7141438 Nostoc sp. UHCC 0702 chromosome, complete genome blastn 557 65.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. UHCC 0702
16929920 16929920 PRJNA1248424_P_NODE_43854_length_344_cov_2.557196_g37791_i0 PRJNA1248424 43854 344 2.557196 8.79675424 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 52.8 0.033   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g37791 i0 100 0.0813953488372093 28 0 8 0 227 254 804753 804726 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 28 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
23305682 23305682 PRJNA1248424_P_NODE_77199_length_244_cov_0.900585_g71130_i0 PRJNA1248424 77199 244 0.900585 2.1974274 Trichodesmium erythraeum 1206 Bacteria Bacteria 71.3 6.08e-8   NTclustered gi|110164990|gb|CP000393.1| 203124 g71130 i0 100 0.307377049180328 38 0 16 0 93 130 7378766 7378729 Trichodesmium erythraeum IMS101, complete genome blastn 75 71.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Microcoleaceae Trichodesmium Trichodesmium erythraeum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;