RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1247234" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1247234 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4178671 4178671 PRJNA1247234_P_NODE_22264_length_250_cov_0.881356_g22108_i0 PRJNA1247234 22264 250 0.881356 2.20339 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|345894117|ref|NC_015981.1| 5932 g22108 i0 100 0.112 28 0 11 0 195 222 25570 25597 Ichthyophthirius multifiliis mitochondrion, complete genome blastn 28 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
10555544 10555544 PRJNA1247234_P_NODE_2249_length_637_cov_2.895390_g2103_i0 PRJNA1247234 2249 637 2.89539 18.4436343 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 1051 0   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g2103 i0 97.115 87.4897959183673 624 16 98 2 15 637 1 623 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 55731 1051 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;