RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA1247234" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1247234 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
351086 351086 PRJNA1247234_P_NODE_10381_length_337_cov_1.181818_g10225_i0 PRJNA1247234 10381 337 1.181818 3.98272666 Acaromyces ingoldii 215250 Fungi Fungi 296 1.33e-75   NTclustered gi|1418949390|ref|XM_025525590.1| 215250 g10225 i0 96.648 53.0830860534125 179 5 53 1 1 179 877 700 Acaromyces ingoldii hypothetical protein (FA10DRAFT_59207), mRNA blastn 17889 296 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Exobasidiales Cryptobasidiaceae Acaromyces Acaromyces ingoldii
351291 351291 PRJNA1247234_P_NODE_21861_length_251_cov_0.876404_g21705_i0 PRJNA1247234 21861 251 0.876404 2.19977404 Entyloma ficariae 84747 Fungi Fungi 200 7.679999999999999e-47   NTclustered gi|1859735553|gb|MT644871.1| 84747 g21705 i0 81.349 68.7011952191235 252 42 100 4 1 251 5941 5694 Entyloma ficariae isolate DM1162 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17244 200 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales Entylomataceae Entyloma Entyloma ficariae
2902216 2902216 PRJNA1247234_P_NODE_17843_length_269_cov_1.163265_g17687_i0 PRJNA1247234 17843 269 1.163265 3.12918285 Kalmanozyma brasiliensis 1392244 Fungi Fungi 165 3.03e-36   NTclustered gi|2576843289|ref|XM_016436560.2| 1365824 g17687 i0 79.237 0.877323420074349 236 49 88 0 6 241 365 130 Kalmanozyma brasiliensis GHG001 Alpha-D-phosphohexomutase, C-terminal (PSEUBRA_003407), partial mRNA blastn 236 165 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Kalmanozyma Kalmanozyma brasiliensis
4879744 4879744 PRJNA1247234_P_NODE_17824_length_269_cov_1.193878_g17668_i0 PRJNA1247234 17824 269 1.193878 3.21153182 Ustilaginaceae 5268 Fungi Fungi 159 1.41e-34   NTclustered gi|758977865|ref|XM_011390682.1| 5270 g17668 i0 84.242 1.23791821561338 165 24 61 2 9 172 2773 2936 Mycosarcoma maydis putative H+-transporting P-type ATPase (UMAG_02581), partial mRNA blastn 333 159 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis
9279665 9279665 PRJNA1247234_P_NODE_20848_length_252_cov_0.871508_g20692_i0 PRJNA1247234 20848 252 0.871508 2.19620016 Mycosarcoma maydis 5270 Fungi Fungi 315 2.6399999999999992e-81   NTclustered gi|758973325|ref|XM_011388420.1| 5270 g20692 i0 89.243 11.9126984126984 251 27 99 0 2 252 973 1223 Mycosarcoma maydis putative NADH2 dehydrogenase (ubiquinone) flavoprotein 1 (UMAG_11170), partial mRNA blastn 3002 315 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis
9279768 9279768 PRJNA1247234_P_NODE_26608_length_244_cov_0.912281_g26452_i0 PRJNA1247234 26608 244 0.912281 2.22596564 Thecaphora frezii 1269715 Fungi Fungi 287 5.54e-73   NTclustered gi|2221572550|gb|MW691409.1| 1269715 g26452 i0 88.559 3.24180327868852 236 27 97 0 1 236 1074 839 Thecaphora frezii clone V_5 putative nad binding dehydrogenase mRNA, complete cds blastn 791 287 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Urocystidales Glomosporiaceae Thecaphora Thecaphora frezii
10555574 10555574 PRJNA1247234_P_NODE_23989_length_247_cov_1.580460_g23833_i0 PRJNA1247234 23989 247 1.58046 3.9037362 Kalmanozyma brasiliensis 1392244 Fungi Fungi 250 7.38e-62   NTclustered gi|1023184729|ref|XM_016437881.1| 1365824 g23833 i0 85.477 2.48987854251012 241 33 97 2 5 244 240 1 Kalmanozyma brasiliensis GHG001 CsbD-like protein (PSEUBRA_004332), partial mRNA blastn 615 250 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Kalmanozyma Kalmanozyma brasiliensis
11254975 11254975 PRJNA1247234_P_NODE_17989_length_267_cov_2.979381_g17833_i0 PRJNA1247234 17989 267 2.979381 7.95494727 Polyporaceae 5317 Fungi Fungi 483 7.31e-132   NTclustered gi|77379308|gb|DQ208413.1| 5315 g17833 i0 99.251 107.868913857678 267 2 100 0 1 267 1601 1867 Ganoderma lucidum strain C-2 large subunit ribosomal RNA gene, partial sequence blastn 28801 483 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma lucidum
11829988 11829988 PRJNA1247234_P_NODE_17330_length_272_cov_3.432161_g17174_i0 PRJNA1247234 17330 272 3.432161 9.33547792 Ganoderma lucidum 5315 Fungi Fungi 429 9.869999999999999e-116   NTclustered gi|2724480650|gb|PP467489.1| 5315 g17174 i0 95.238 104.761029411765 273 10 100 3 1 272 6402 6672 Ganoderma lucidum strain Red Reishi No.6 intergenic spacer 2, partial sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S large subunit ribosomal RNA gene, intergenic spacer 1, 5S ribosomal RNA gene, intergenic spacer 2, 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S large subunit ribosomal RNA gene, intergenic spacer 1, 5S ribosomal RNA gene, and intergenic spacer 2, complete sequence; and 18S small subunit ribosomal RNA gene, partial sequence blastn 28495 429 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma lucidum
13805027 13805027 PRJNA1247234_P_NODE_11751_length_321_cov_1.294355_g11595_i0 PRJNA1247234 11751 321 1.294355 4.15487955 Trametes 5324 Fungi Fungi 588 1.8599999999999994e-163   NTclustered gi|2055954241|gb|MZ424285.1| 5327 g11595 i0 99.688 100 321 1 100 0 1 321 268 588 Trametes hirsuta strain 575 large subunit ribosomal RNA gene, partial sequence blastn 32100 588 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes hirsuta
13805122 13805122 PRJNA1247234_P_NODE_24191_length_247_cov_0.896552_g24035_i0 PRJNA1247234 24191 247 0.896552 2.21448344 Malassezia 55193 Fungi Fungi 457 4.05e-124   NTclustered gi|1859980207|gb|MT645548.1| 76775 g24035 i0 100 100 247 0 100 0 1 247 222 468 Malassezia restricta strain RM11 large subunit ribosomal RNA gene, partial sequence blastn 24700 457 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
15654374 15654374 PRJNA1247234_P_NODE_18073_length_267_cov_1.206186_g17917_i0 PRJNA1247234 18073 267 1.206186 3.22051662 Kalmanozyma brasiliensis 1392244 Fungi Fungi 193 1.38e-44   NTclustered gi|1023177687|ref|XM_016436031.1| 1365824 g17917 i0 93.13 36.8913857677903 131 9 49 0 1 131 131 1 Kalmanozyma brasiliensis GHG001 Small GTPase superfamily, ARF/SAR type (PSEUBRA_000406), partial mRNA blastn 9850 193 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Kalmanozyma Kalmanozyma brasiliensis
17629395 17629395 PRJNA1247234_P_NODE_13374_length_304_cov_1.350649_g13218_i0 PRJNA1247234 13374 304 1.350649 4.10597296 Ustilaginaceae 5268 Fungi Fungi 139 2.11e-28   NTclustered gi|1701847647|ref|XM_029882114.1| 280036 g13218 i0 89.189 1.57565789473684 111 12 37 0 1 111 418 528 Sporisorium graminicola uncharacterized protein (EX895_001515), partial mRNA blastn 479 139 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Sporisorium Sporisorium graminicola
17629494 17629494 PRJNA1247234_P_NODE_24874_length_246_cov_0.901734_g24718_i0 PRJNA1247234 24874 246 0.901734 2.21826564 Ustilaginaceae 5268 Fungi Fungi 237 5.72e-58   NTclustered gi|758981057|ref|XM_011391933.1| 5270 g24718 i0 90.503 68.9593495934959 179 17 73 0 1 179 179 1 Mycosarcoma maydis Hsp70 family ATPase (UMAG_03791), partial mRNA blastn 16964 237 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis
17629590 17629590 PRJNA1247234_P_NODE_9794_length_345_cov_0.860294_g9638_i0 PRJNA1247234 9794 345 0.860294 2.9680143 Ustilaginaceae 5268 Fungi Fungi 503 7.5e-138   NTclustered gi|307602965|gb|HQ013028.1| 882789 g9638 i0 93.255 98.3333333333333 341 23 99 0 3 343 564 904 Macalpinomyces spermophorus voucher BRIP 51858 elongation factor 1-alpha gene, partial cds blastn 33925 507 0.992110453648915 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Macalpinomyces Macalpinomyces spermophorus
18203229 18203229 PRJNA1247234_P_NODE_25715_length_245_cov_0.906977_g25559_i0 PRJNA1247234 25715 245 0.906977 2.22209365 Sporisorium graminicola 280036 Fungi Fungi 156 1.64e-33   NTclustered gi|1701847421|ref|XM_029882001.1| 280036 g25559 i0 78.884 1.45714285714286 251 37 98 15 4 243 2642 2397 Sporisorium graminicola uncharacterized protein (EX895_001402), partial mRNA blastn 357 156 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Sporisorium Sporisorium graminicola
19477598 19477598 PRJNA1247234_P_NODE_25756_length_245_cov_0.906977_g25600_i0 PRJNA1247234 25756 245 0.906977 2.22209365 Kalmanozyma brasiliensis 1392244 Fungi Fungi 169 2.1e-37   NTclustered gi|1023181355|ref|XM_016435595.1| 1365824 g25600 i0 79.352 6.26122448979592 247 45 99 6 1 244 736 493 Kalmanozyma brasiliensis GHG001 Glucosamine/galactosamine-6-phosphate isomerase (PSEUBRA_002436), partial mRNA blastn 1534 169 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Kalmanozyma Kalmanozyma brasiliensis
22028246 22028246 PRJNA1247234_P_NODE_25278_length_245_cov_2.325581_g25122_i0 PRJNA1247234 25278 245 2.325581 5.69767345 Pseudozyma hubeiensis 327079 Fungi Fungi 200 7.46e-47   NTclustered gi|808370299|ref|XM_012334980.1| 1305764 g25122 i0 83.105 0.893877551020408 219 37 89 0 1 219 2517 2299 Pseudozyma hubeiensis SY62 hypothetical protein partial mRNA blastn 219 200 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma hubeiensis
24003665 24003665 PRJNA1247234_P_NODE_13159_length_306_cov_1.339056_g13003_i0 PRJNA1247234 13159 306 1.339056 4.09751136 Basidiomycota 5204 Fungi Fungi 564 2.96e-156   NTclustered gi|1545773614|ref|NG_063541.1| 105988 g13003 i0 100 99.6764705882353 305 0 99 0 2 306 1104 800 Leucosporidium fellii JCM 9887 18S rRNA gene, partial sequence; from TYPE material blastn 30501 564 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium fellii
24577617 24577617 PRJNA1247234_P_NODE_13660_length_302_cov_1.021834_g13504_i0 PRJNA1247234 13660 302 1.021834 3.08593868 Sporisorium graminicola 280036 Fungi Fungi 431 3.09e-116   NTclustered gi|1701859235|ref|XM_029886883.1| 280036 g13504 i0 92.691 88.6059602649007 301 18 99 3 1 299 818 520 Sporisorium graminicola uncharacterized protein (EX895_006291), partial mRNA blastn 26759 431 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Sporisorium Sporisorium graminicola
24577691 24577691 PRJNA1247234_P_NODE_17920_length_268_cov_1.256410_g17764_i0 PRJNA1247234 17920 268 1.25641 3.3671788 Pseudozyma flocculosa 84751 Fungi Fungi 202 2.3e-47   NTclustered gi|630966347|ref|XM_007881391.1| 1277687 g17764 i0 87.791 21.9925373134328 172 21 64 0 83 254 139 310 Pseudozyma flocculosa PF-1 uncharacterized protein (PFL1_03868), partial mRNA blastn 5894 202 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma flocculosa

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;