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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1247234" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA1247234 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
351153 351153 PRJNA1247234_P_NODE_13841_length_300_cov_1.374449_g13685_i0 PRJNA1247234 13841 300 1.374449 4.123347 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 521 1.7699999999999996e-143   NTclustered gi|325194684|emb|FR825494.1| 890382 g13685 i0 98 76.9933333333333 300 6 100 0 1 300 94 393 Albugo laibachii Nc14, genomic contig CONTIG_2365_NC14_v4_847_33331 blastn 23098 521 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
4178671 4178671 PRJNA1247234_P_NODE_22264_length_250_cov_0.881356_g22108_i0 PRJNA1247234 22264 250 0.881356 2.20339 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|345894117|ref|NC_015981.1| 5932 g22108 i0 100 0.112 28 0 11 0 195 222 25570 25597 Ichthyophthirius multifiliis mitochondrion, complete genome blastn 28 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
10555544 10555544 PRJNA1247234_P_NODE_2249_length_637_cov_2.895390_g2103_i0 PRJNA1247234 2249 637 2.89539 18.4436343 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 1051 0   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g2103 i0 97.115 87.4897959183673 624 16 98 2 15 637 1 623 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 55731 1051 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a
18203146 18203146 PRJNA1247234_P_NODE_20895_length_252_cov_0.871508_g20739_i0 PRJNA1247234 20895 252 0.871508 2.19620016 Phytophthora sansomeana 555429 SAR_Eukaryotes SAR_Eukaryotes 368 2e-97   NTclustered gi|1770692515|ref|NC_045089.1| 555429 g20739 i0 93.548 99.1150793650794 248 15 98 1 4 250 187 434 Phytophthora sansomeana mitochondrion, complete genome blastn 24977 368 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sansomeana
20753165 20753165 PRJNA1247234_P_NODE_7517_length_383_cov_1.006452_g7361_i0 PRJNA1247234 7517 383 1.006452 3.85471116 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 708 0   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g7361 i0 100 3.16187989556136 383 0 100 0 1 383 452 70 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 1211 708 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
21453573 21453573 PRJNA1247234_P_NODE_24357_length_247_cov_0.896552_g24201_i0 PRJNA1247234 24357 247 0.896552 2.21448344 Glissomonadida 1238681 SAR_Eukaryotes SAR_Eukaryotes 455 1.4600000000000002e-123   NTclustered gi|2030163897|gb|MZ044034.1| 1808984 g24201 i0 100 19.7773279352227 246 0 99 0 1 246 756 511 Rosculus terrestris isolate S14D1 small subunit ribosomal RNA gene, partial sequence blastn 4885 455 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus terrestris
22028053 22028053 PRJNA1247234_P_NODE_15238_length_288_cov_1.595349_g15082_i0 PRJNA1247234 15238 288 1.595349 4.59460512 Synura truttae 1285454 SAR_Eukaryotes SAR_Eukaryotes 333 8.5e-87   NTclustered gi|859809655|gb|KM590756.1| 1285454 g15082 i0 89.961 133.03125 259 24 90 2 31 288 2217 1960 Synura truttae strain Hanjeong080611J 23S ribosomal RNA gene, partial sequence; plastid blastn 38313 333 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura truttae
23303601 23303601 PRJNA1247234_P_NODE_10559_length_335_cov_1.095420_g10403_i0 PRJNA1247234 10559 335 1.09542 3.669657 Hyaloperonospora parasitica 123356 SAR_Eukaryotes SAR_Eukaryotes 614 3.209999999999999e-171   NTclustered gi|33520224|gb|AY273969.1| 123356 g10403 i0 99.701 100.002985074627 335 1 100 0 1 335 208 542 Hyaloperonospora parasitica large subunit ribosomal RNA gene, partial sequence blastn 33501 614 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora parasitica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;