contig_metadata
34 rows where analysis = "blastn", bioproject = "PRJNA1245487" and tax_clade = "core chlorophytes"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 350876 | 350876 | PRJNA1245487_P_NODE_10961_length_356_cov_5.724382_g10623_i0 | PRJNA1245487 | 10961 | 356 | 5.724382 | 20.37879992 | Chloroidium ellipsoideum | 63676 | Plants | Plants | 316 | 1.08e-81 | NTclustered | gi|1169296931|gb|KY364701.1| | 63676 | g10623 | i0 | 83.008 | 17.2724719101124 | 359 | 51 | 99 | 9 | 1 | 355 | 5387 | 5739 | Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 6149 | 316 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Watanabeales | Watanabeaceae | Chloroidium | Chloroidium ellipsoideum | |
| 1625862 | 1625862 | PRJNA1245487_P_NODE_23442_length_205_cov_7.242424_g23104_i0 | PRJNA1245487 | 23442 | 205 | 7.242424 | 14.8469692 | Chlamydomonas zimbabwiensis | 158510 | Plants | Plants | 274 | 3.51e-69 | NTclustered | gi|66864303|gb|DQ015758.1| | 158510 | g23104 | i0 | 90.732 | 101.614634146341 | 205 | 19 | 100 | 0 | 1 | 205 | 2521 | 2317 | Chlamydomonas zimbabwiensis strain UTEX 2214 26S ribosomal RNA gene, partial sequence | blastn | 20831 | 274 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas zimbabwiensis | |
| 1625865 | 1625865 | PRJNA1245487_P_NODE_2462_length_784_cov_4.362869_g2160_i0 | PRJNA1245487 | 2462 | 784 | 4.362869 | 34.20489296 | Chlamydomonas chlamydogama | 225041 | Plants | Plants | 1218 | 0 | NTclustered | gi|2386956196|ref|NC_068623.1| | 225041 | g2160 | i0 | 94.684 | 145.836734693878 | 790 | 33 | 100 | 6 | 1 | 784 | 5407 | 6193 | Chlamydomonas chlamydogama strain 11-48b chloroplast, complete genome | blastn | 114336 | 1218 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas chlamydogama | |
| 2326703 | 2326703 | PRJNA1245487_P_NODE_18222_length_260_cov_1.807487_g17884_i0 | PRJNA1245487 | 18222 | 260 | 1.807487 | 4.6994662 | root | 1 | Root_unresolved | Root_unresolved | 470 | 5.519999999999998e-128 | NTclustered | gi|1232074|dbj|D11349.1|CHLCPSA16S | 3082 | g17884 | i0 | 99.231 | 99.7769230769231 | 260 | 2 | 100 | 0 | 1 | 260 | 888 | 629 | Chlorella saccharophila (strain 211-1d) chloroplast gene for 16S ribosomal RNA | blastn | 25942 | 470 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Watanabeales | Watanabeaceae | Chloroidium | Chloroidium saccharophilum | |
| 2901915 | 2901915 | PRJNA1245487_P_NODE_16663_length_274_cov_1.681592_g16325_i0 | PRJNA1245487 | 16663 | 274 | 1.681592 | 4.60756208 | Aegagropila linnaei | 162062 | Plants | Plants | 302 | 2.2600000000000002e-77 | NTclustered | gi|1279575452|gb|MF683076.1| | 162062 | g16325 | i0 | 87.132 | 123.306569343066 | 272 | 28 | 98 | 7 | 2 | 270 | 4064 | 3797 | Aegagropila linnaei 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast | blastn | 33786 | 302 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Cladophorales | Pithophoraceae | Aegagropila | Aegagropila linnaei | |
| 3601829 | 3601829 | PRJNA1245487_P_NODE_15123_length_290_cov_7.013825_g14785_i0 | PRJNA1245487 | 15123 | 290 | 7.013825 | 20.3400925 | Trebouxia | 13786 | Plants | Plants | 451 | 2.27e-122 | NTclustered | gi|162134340|gb|EU123979.1| | 160068 | g14785 | i0 | 97.71 | 128.348275862069 | 262 | 6 | 90 | 0 | 2 | 263 | 1210 | 1471 | Trebouxia aggregata strain SAG 219-1d large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf210) and hypothetical protein (orf277) genes, complete cds; chloroplast | blastn | 37221 | 451 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia aggregata | |
| 3601955 | 3601955 | PRJNA1245487_P_NODE_22743_length_231_cov_6.544304_g22405_i0 | PRJNA1245487 | 22743 | 231 | 6.544304 | 15.11734224 | Eukaryota | 2759 | Plants | Plants | 422 | 1.37e-113 | NTclustered | gi|1273623725|gb|KY033354.1| | 285713 | g22405 | i0 | 99.567 | 101.458874458874 | 231 | 1 | 100 | 0 | 1 | 231 | 7723 | 7493 | Uncultured Trebouxia photobiont voucher Lendemer 46119 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 23437 | 422 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | uncultured Trebouxia photobiont | |
| 5454650 | 5454650 | PRJNA1245487_P_NODE_4985_length_561_cov_5.764344_g4652_i0 | PRJNA1245487 | 4985 | 561 | 5.764344 | 32.33796984 | Trebouxia asymmetrica | 13787 | Plants | Plants | 1020 | 0 | NTclustered | gi|189909382|gb|EU725860.1| | 13787 | g4652 | i0 | 99.466 | 117.001782531194 | 562 | 2 | 100 | 1 | 1 | 561 | 1179 | 1740 | Trebouxia asymmetrica strain SAG 48.88 23S large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast | blastn | 65638 | 1020 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia asymmetrica | |
| 5454683 | 5454683 | PRJNA1245487_P_NODE_9845_length_381_cov_1.685065_g9507_i0 | PRJNA1245487 | 9845 | 381 | 1.685065 | 6.42009765 | Chloroidium sp. KL-2023a | 3031248 | Plants | Plants | 621 | 2.2099999999999997e-173 | NTclustered | gi|2450595352|gb|ON986219.1| | 3031248 | g9507 | i0 | 96.063 | 133.803149606299 | 381 | 15 | 100 | 0 | 1 | 381 | 220645 | 221025 | Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome | blastn | 50979 | 621 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Watanabeales | Watanabeaceae | Chloroidium | Chloroidium sp. KL-2023a | |
| 8704247 | 8704247 | PRJNA1245487_P_NODE_23327_length_211_cov_8.471014_g22989_i0 | PRJNA1245487 | 23327 | 211 | 8.471014 | 17.87383954 | Trebouxia | 13786 | Plants | Plants | 372 | 1.25e-98 | NTclustered | gi|118412470|gb|EF095231.1| | 285713 | g22989 | i0 | 98.578 | 100.009478672986 | 211 | 2 | 99 | 1 | 1 | 210 | 168 | 378 | Uncultured Trebouxia photobiont isolate TSB37055 internal transcribed spacer 1, partial sequence; and 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence | blastn | 21102 | 372 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | uncultured Trebouxia photobiont | |
| 9279262 | 9279262 | PRJNA1245487_P_NODE_13568_length_311_cov_5.739496_g13230_i0 | PRJNA1245487 | 13568 | 311 | 5.739496 | 17.84983256 | Koliella longiseta | 33092 | Plants | Plants | 544 | 3.93e-150 | NTclustered | gi|371782094|emb|HE610126.1| | 33092 | g13230 | i0 | 98.387 | 38.0996784565916 | 310 | 4 | 99 | 1 | 2 | 311 | 6121 | 5813 | Koliella longiseta 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 470-1 | blastn | 11849 | 544 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Prasiolales | Koliellaceae | Koliella | Koliella longiseta | |
| 10555157 | 10555157 | PRJNA1245487_P_NODE_15329_length_288_cov_3.186047_g14991_i0 | PRJNA1245487 | 15329 | 288 | 3.186047 | 9.17581536 | Myrmecia israelensis | 3171 | Plants | Plants | 477 | 3.71e-130 | NTclustered | gi|723456786|ref|NC_025525.1| | 3171 | g14991 | i0 | 96.54 | 96.1388888888889 | 289 | 8 | 100 | 2 | 1 | 288 | 3768 | 4055 | Myrmecia israelensis culture-collection UTEX:1181 chloroplast, complete genome | blastn | 27688 | 477 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Myrmecia | Myrmecia israelensis | |
| 11254482 | 11254482 | PRJNA1245487_P_NODE_10809_length_359_cov_9.475524_g10471_i0 | PRJNA1245487 | 10809 | 359 | 9.475524 | 34.01713116 | Myrmecia | 13617 | Plants | Plants | 664 | 0 | NTclustered | gi|871410|emb|Z47208.1| | 41461 | g10471 | i0 | 100 | 99.9192200557103 | 359 | 0 | 100 | 0 | 1 | 359 | 962 | 604 | M.astigmatica gene for 18S ribosomal RNA (small subunit) | blastn | 35871 | 664 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Myrmecia | Myrmecia astigmatica | |
| 11829620 | 11829620 | PRJNA1245487_P_NODE_10710_length_361_cov_12.163194_g10372_i0 | PRJNA1245487 | 10710 | 361 | 12.163194 | 43.90913034 | Pleurastrum aquaticum | 3134064 | Plants | Plants | 632 | 9.609999999999998e-177 | NTclustered | gi|2707893997|gb|PP574979.1| | 3134064 | g10372 | i0 | 98.087 | 51.612188365651 | 366 | 2 | 100 | 2 | 1 | 361 | 281 | 646 | Pleurastrum aquaticum strain FACHB-3458 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 18632 | 632 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Pleurastraceae | Pleurastrum | Pleurastrum aquaticum | |
| 12529943 | 12529943 | PRJNA1245487_P_NODE_16050_length_280_cov_4.173913_g15712_i0 | PRJNA1245487 | 16050 | 280 | 4.173913 | 11.6869564 | Eukaryota | 2759 | Plants | Plants | 507 | 4.58e-139 | NTclustered | gi|359385204|emb|FR865615.1| | 55403 | g15712 | i0 | 99.286 | 99.9607142857143 | 280 | 2 | 100 | 0 | 1 | 280 | 929 | 650 | Chlorella reisiglii genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, culture collection CCAP 11/8 | blastn | 27989 | 507 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Elliptochloris | Elliptochloris subsphaerica | |||
| 12529957 | 12529957 | PRJNA1245487_P_NODE_16730_length_273_cov_3.465000_g16392_i0 | PRJNA1245487 | 16730 | 273 | 3.465 | 9.45945 | Trebouxia | 13786 | Plants | Plants | 505 | 1.6e-138 | NTclustered | gi|2154806798|gb|OL614541.1| | 53267 | g16392 | i0 | 100 | 100 | 273 | 0 | 100 | 0 | 1 | 273 | 313 | 41 | Trebouxia jamesii clone NJ2018044 small subunit ribosomal RNA gene, partial sequence | blastn | 27300 | 505 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia jamesii | |
| 13104923 | 13104923 | PRJNA1245487_P_NODE_14451_length_298_cov_6.511111_g14113_i0 | PRJNA1245487 | 14451 | 298 | 6.511111 | 19.40311078 | Coccomyxa subellipsoidea | 248742 | Plants | Plants | 359 | 1.46e-94 | NTclustered | gi|1360638125|gb|AC277041.1| | 574566 | g14113 | i0 | 88.591 | 19.3087248322148 | 298 | 31 | 99 | 3 | 3 | 298 | 39832 | 39536 | Coccomyxa subellipsoidea C-169 clone FAHX05-A01, complete sequence | blastn | 5754 | 359 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa subellipsoidea | ||
| 14380161 | 14380161 | PRJNA1245487_P_NODE_11712_length_342_cov_2.609665_g11374_i0 | PRJNA1245487 | 11712 | 342 | 2.609665 | 8.9250543 | Trebouxia lynnae | 1825957 | Plants | Plants | 603 | 7.119999999999999e-168 | NTclustered | gi|1016111943|gb|KU716051.1| | 1825957 | g11374 | i0 | 98.534 | 17.2309941520468 | 341 | 5 | 99 | 0 | 1 | 341 | 6651 | 6991 | Trebouxia lynnae 26S-18S intergenic spacer region, partial sequence; 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence; and 26S-18S rRNA intergenic spacer region, partial sequence | blastn | 5893 | 603 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia lynnae | |
| 14380229 | 14380229 | PRJNA1245487_P_NODE_17492_length_266_cov_3.098446_g17154_i0 | PRJNA1245487 | 17492 | 266 | 3.098446 | 8.24186636 | Chlamydomonas noctigama | 28456 | Plants | Plants | 407 | 4.509999999999999e-109 | NTclustered | gi|17028277|gb|L43353.1|CRECPRRNLD | 28456 | g17154 | i0 | 94.361 | 132.026315789474 | 266 | 14 | 100 | 1 | 1 | 266 | 14 | 278 | Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL) gene | blastn | 35119 | 407 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas noctigama | |
| 15078951 | 15078951 | PRJNA1245487_P_NODE_21132_length_245_cov_1.325581_g20794_i0 | PRJNA1245487 | 21132 | 245 | 1.325581 | 3.24767345 | Trebouxia | 13786 | Plants | Plants | 436 | 5.229999999999999e-118 | NTclustered | gi|162134351|gb|EU123983.1| | 160068 | g20794 | i0 | 98.776 | 100 | 245 | 3 | 100 | 0 | 1 | 245 | 1944 | 2188 | Trebouxia aggregata strain SAG 219-1d D1 reaction center protein of photosystem II (psbA) and hypothetical protein (orf341) genes, complete cds; and tRNA-His (trnH(gug)) and tRNA-Gly (trnG(ucc)) genes, complete sequence; chloroplast | blastn | 24500 | 436 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia aggregata | |
| 15078984 | 15078984 | PRJNA1245487_P_NODE_23292_length_213_cov_5.871429_g22954_i0 | PRJNA1245487 | 23292 | 213 | 5.871429 | 12.50614377 | Myrmecia | 13617 | Plants | Plants | 381 | 2.1e-101 | NTclustered | gi|871410|emb|Z47208.1| | 41461 | g22954 | i0 | 99.061 | 100.69014084507 | 213 | 1 | 100 | 1 | 1 | 213 | 306 | 95 | M.astigmatica gene for 18S ribosomal RNA (small subunit) | blastn | 21447 | 381 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Myrmecia | Myrmecia astigmatica | |
| 15079025 | 15079025 | PRJNA1245487_P_NODE_3512_length_667_cov_11.242424_g3186_i0 | PRJNA1245487 | 3512 | 667 | 11.242424 | 74.98696808 | Trebouxiophyceae | 75966 | Plants | Plants | 861 | 0 | NTclustered | gi|77627727|dbj|AB237642.1| | 3077 | g3186 | i0 | 90.135 | 99.9565217391304 | 669 | 57 | 99 | 9 | 1 | 666 | 1437 | 2099 | Chlorella vulgaris NIES:227 gene for 28S ribosomal RNA, partial sequence | blastn | 66671 | 869 | 0.990794016110472 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella vulgaris | |
| 15654054 | 15654054 | PRJNA1245487_P_NODE_14113_length_303_cov_3.852174_g13775_i0 | PRJNA1245487 | 14113 | 303 | 3.852174 | 11.67208722 | Borodinellopsis texensis | 1148060 | Plants | Plants | 411 | 4.039999999999999e-110 | NTclustered | gi|1509777606|gb|MG778121.1| | 1148060 | g13775 | i0 | 92.15 | 127.09900990099 | 293 | 19 | 96 | 4 | 1 | 292 | 245524 | 245235 | Borodinellopsis texensis cell division protein (ftsH), ribosomal protein S8 (rps8), ribosomal protein L5 (rpl5), ribosomal protein L14 (rpl14), and ribosomal protein L16 (rpl16) genes, complete cds; tRNA-Arg (trnR-ACG) gene, complete sequence; hypothetical chloroplast RF1 (ycf1), ribosomal protein S12 (rps12), subunit IX of photosystem I (psaJ), CF0 subunit IV of ATP synthase (atpI), photosystem II reaction center subunit X (psbJ), and P700 apoprotein A1 of photosystem I (psaA) genes, complete cds; exon 2,; tRNA-Gly (trnG-GCC) and tRNA-Met (trnM-CAU) genes, complete sequence; ATP-dependent Clp protease proteolytic subunit (clpP) gene, complete cds; tRNA-Leu (trnL-UAG) gene, complete sequence; photochlorophyllide reductase subunit L (chlL) gene, complete cds; tRNA-Gly (trnG-UCC) and tRNA-Trp (trnW-CCA) genes, complete sequence; photosystem II protein K (psbK) gene, complete cds; tRNA-Cys (trnC-GCA) gene, complete sequence; protochlorophyllide reductase subunit B (chlB), D1 reaction center protein of photosystem II (psbA), ribosomal protein S2 (rps2), and ribosomal protein S18 (rps18) genes, complete cds; exon 3,; tRNA-Lys (trnK-UUU), tRNA-Ser (trnS-GCU), and tRNA-Met (trnM-CAU) genes, complete sequence; beta'' subunit of RNA polymerase (rpoC2), ribosomal protein S3 (rps3), cytochrome b6/f complex subunit V (petG), photosystem II protein L (psbL), photosystem II protein VI (psbF), ATP synthase CF0 C subunit (atpH), ATP synthase CF0 B subunit (atpF), P700 apoprotein A2 of photosystem I (psaB), CF1 alpha subunit of ATP synthase (atpA), and photosystem II protein I (psbI) genes, complete cds; tRNA-Ser (trnS-UGA) gene, complete sequence; ribosomal protein L20 (rpl20) gene, complete cds; ribosomal protein L32 (rpl32) gene, partial cds; tRNA-Val (trnV-UAC), tRNA-Pro (trnP-UGG), and tRNA-His (trnH-GUG) genes, complete sequence; CP43 chlorophyll apoprotein of photosystem II (psbC), hypothetical protein, beta' subunit of RNA polymerase (rpoC1), apocytochrome f of cytochrome b6/f complex (petA), and cytochrome b6/f complex s… | blastn | 38511 | 411 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlorococcaceae | Borodinellopsis | Borodinellopsis texensis | |
| 15654197 | 15654197 | PRJNA1245487_P_NODE_7113_length_463_cov_1.920513_g6777_i0 | PRJNA1245487 | 7113 | 463 | 1.920513 | 8.89197519 | Trebouxia aggregata | 160068 | Plants | Plants | 564 | 4.67e-156 | NTclustered | gi|162134245|gb|EU123948.1| | 160068 | g6777 | i0 | 88.501 | 69.4989200863931 | 487 | 29 | 100 | 13 | 1 | 463 | 16200 | 15717 | Trebouxia aggregata strain SAG 219-1d ribosomal protein S2 (rps2) gene, complete cds; tRNA-Met (trnMe(cau)) and large subunit ribosomal RNA (rnl) genes, complete sequence; putative site-specific DNA endonuclease (orf365) gene, complete cds; small subunit ribosomal RNA (rns) and tRNA-Met (trnMf(cau)) genes, complete sequence; cytochrome c oxidase subunit 1 (cox1), putative site-specific DNA endonuclease (orf335), and putative site-specific DNA endonuclease (orf256) genes, complete cds; tRNA-Phe (trnF(gaa)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; and apocytochrome b (cob) and putative site-specific DNA endonuclease (orf334) genes, complete cds; mitochondrial | blastn | 32178 | 564 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia aggregata | |
| 18202836 | 18202836 | PRJNA1245487_P_NODE_20555_length_247_cov_2.022989_g20217_i0 | PRJNA1245487 | 20555 | 247 | 2.022989 | 4.99678283 | Polulichloris maxima | 2704661 | Plants | Plants | 427 | 3.17e-115 | NTclustered | gi|2473928686|ref|NC_072905.1| | 2704661 | g20217 | i0 | 97.976 | 121.821862348178 | 247 | 4 | 99 | 1 | 2 | 247 | 128915 | 128669 | Polulichloris maxima clone L123 chloroplast, complete genome | blastn | 30090 | 427 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Watanabeales | Watanabeaceae | Polulichloris | Polulichloris maxima | |
| 18902858 | 18902858 | PRJNA1245487_P_NODE_18575_length_257_cov_1.641304_g18237_i0 | PRJNA1245487 | 18575 | 257 | 1.641304 | 4.21815128 | Trebouxia | 13786 | Plants | Plants | 475 | 1.1699999999999999e-129 | NTclustered | gi|255506485|gb|FJ687229.1| | 53269 | g18237 | i0 | 100 | 101 | 257 | 0 | 100 | 0 | 1 | 257 | 950 | 694 | Trebouxia gelatinosa strain UTEX 906 23S ribosomal RNA gene, partial sequence; and hypothetical protein gene, complete cds; chloroplast | blastn | 25957 | 475 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia gelatinosa | |
| 18902929 | 18902929 | PRJNA1245487_P_NODE_22575_length_234_cov_3.099379_g22237_i0 | PRJNA1245487 | 22575 | 234 | 3.099379 | 7.25254686 | Trebouxiophyceae | 75966 | Plants | Plants | 416 | 6.449999999999999e-112 | NTclustered | gi|723456786|ref|NC_025525.1| | 3171 | g22237 | i0 | 98.718 | 125.034188034188 | 234 | 3 | 100 | 0 | 1 | 234 | 3308 | 3075 | Myrmecia israelensis culture-collection UTEX:1181 chloroplast, complete genome | blastn | 29258 | 416 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Myrmecia | Myrmecia israelensis | |
| 19477166 | 19477166 | PRJNA1245487_P_NODE_16736_length_273_cov_2.980000_g16398_i0 | PRJNA1245487 | 16736 | 273 | 2.98 | 8.1354 | Chlamydomonas zimbabwiensis | 158510 | Plants | Plants | 422 | 1.66e-113 | NTclustered | gi|66864303|gb|DQ015758.1| | 158510 | g16398 | i0 | 94.545 | 73.6703296703297 | 275 | 12 | 100 | 3 | 1 | 273 | 2927 | 3200 | Chlamydomonas zimbabwiensis strain UTEX 2214 26S ribosomal RNA gene, partial sequence | blastn | 20112 | 422 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas zimbabwiensis | |
| 21453136 | 21453136 | PRJNA1245487_P_NODE_17037_length_270_cov_3.558376_g16699_i0 | PRJNA1245487 | 17037 | 270 | 3.558376 | 9.6076152 | Ignatiaceae | 2682551 | Plants | Plants | 414 | 2.74e-111 | NTclustered | gi|290770740|emb|FN562432.1| | 231078 | g16699 | i0 | 95.736 | 99.1518518518518 | 258 | 9 | 95 | 2 | 14 | 270 | 719 | 975 | Ignatius tetrasporus partial 18S rRNA gene, strain UTEX 2012 | blastn | 26771 | 414 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ignatiales | Ignatiaceae | Ignatius | Ignatius tetrasporus | |
| 22027810 | 22027810 | PRJNA1245487_P_NODE_15378_length_288_cov_1.451163_g15040_i0 | PRJNA1245487 | 15378 | 288 | 1.451163 | 4.17934944 | Tetradesmus obliquus | 3088 | Plants | Plants | 433 | 8.14e-117 | NTclustered | gi|1240946771|gb|KX756229.1| | 3088 | g15040 | i0 | 93.75 | 116.673611111111 | 288 | 18 | 100 | 0 | 1 | 288 | 66947 | 66660 | Tetradesmus obliquus chloroplast, complete genome | blastn | 33602 | 433 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus obliquus | |
| 22027912 | 22027912 | PRJNA1245487_P_NODE_3918_length_634_cov_5.932264_g3590_i0 | PRJNA1245487 | 3918 | 634 | 5.932264 | 37.61055376 | chlorobiont of Psora decipiens | 1938899 | Plants | Plants | 1083 | 0 | NTclustered | gi|1158556075|emb|LT717549.1| | 1938899 | g3590 | i0 | 99.663 | 93.506309148265 | 593 | 1 | 94 | 1 | 42 | 634 | 1 | 592 | Chlorobiont of Psora decipiens partial 26S rRNA gene, isolate Ger1-Swe | blastn | 59283 | 1083 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | chlorobiont of Psora decipiens | ||||
| 24577383 | 24577383 | PRJNA1245487_P_NODE_16720_length_273_cov_7.275000_g16382_i0 | PRJNA1245487 | 16720 | 273 | 7.275 | 19.86075 | Myrmecia israelensis | 3171 | Plants | Plants | 503 | 5.76e-138 | NTclustered | gi|723456786|ref|NC_025525.1| | 3171 | g16382 | i0 | 100 | 111.10989010989 | 272 | 0 | 99 | 0 | 1 | 272 | 2200 | 2471 | Myrmecia israelensis culture-collection UTEX:1181 chloroplast, complete genome | blastn | 30333 | 503 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Myrmecia | Myrmecia israelensis | |
| 24577398 | 24577398 | PRJNA1245487_P_NODE_18280_length_259_cov_6.118280_g17942_i0 | PRJNA1245487 | 18280 | 259 | 6.11828 | 15.8463452 | Trebouxia lynnae | 1825957 | Plants | Plants | 449 | 7.16e-122 | NTclustered | gi|1016111943|gb|KU716051.1| | 1825957 | g17942 | i0 | 98.062 | 100.660231660232 | 258 | 5 | 99 | 0 | 2 | 259 | 5399 | 5142 | Trebouxia lynnae 26S-18S intergenic spacer region, partial sequence; 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence; and 26S-18S rRNA intergenic spacer region, partial sequence | blastn | 26071 | 449 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia lynnae | |
| 25277516 | 25277516 | PRJNA1245487_P_NODE_22140_length_241_cov_3.696429_g21802_i0 | PRJNA1245487 | 22140 | 241 | 3.696429 | 8.90839389 | Ulva | 3118 | Plants | Plants | 187 | 5.699999999999998e-43 | NTclustered | gi|2095862465|gb|MN853879.1| | 3117 | g21802 | i0 | 81.858 | 52.3236514522822 | 226 | 38 | 93 | 2 | 10 | 233 | 36531 | 36307 | Ulva prolifera chloroplast, complete genome | blastn | 12610 | 187 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulvales | Ulvaceae | Ulva | Ulva prolifera |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;