contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA1242190" and tax_phylum = "Ciliophora"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5454315 | 5454315 | PRJNA1242190_S_NODE_11905_length_252_cov_1.748603_g11898_i0 | PRJNA1242190 | 11905 | 252 | 1.748603 | 4.40647956 | Chilodonella uncinata | 151077 | SAR_Eukaryotes | SAR_Eukaryotes | 363 | 9.289999999999996e-96 | NTclustered | gi|347439271|gb|JN111984.1| | 151077 | g11898 | i0 | 97.63 | 82.6984126984127 | 211 | 5 | 100 | 0 | 42 | 252 | 702 | 912 | Chilodonella uncinata strain USA_SC2 clone SP1 beta tubulin (btub) gene, partial cds; macronuclear | blastn | 20840 | 363 | 1 | Eukaryota | Sar | Ciliophora | Phyllopharyngea | Chlamydodontida | Chilodonellidae | Chilodonella | Chilodonella uncinata | ||
| 6153823 | 6153823 | PRJNA1242190_S_NODE_7465_length_311_cov_0.882353_g7458_i0 | PRJNA1242190 | 7465 | 311 | 0.882353 | 2.74411783 | Chilodonella | 151076 | SAR_Eukaryotes | SAR_Eukaryotes | 394 | 4.189999999999999e-105 | NTclustered | gi|1389430804|gb|MH341632.1| | 1654720 | g7458 | i0 | 91.126 | 86.8006430868167 | 293 | 23 | 94 | 2 | 1 | 293 | 1946 | 1657 | Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence | blastn | 26995 | 394 | 1 | Eukaryota | Sar | Ciliophora | Phyllopharyngea | Chlamydodontida | Chilodonellidae | Chilodonella | Chilodonella piscicola | ||
| 7428905 | 7428905 | PRJNA1242190_S_NODE_3226_length_435_cov_5.784530_g3219_i0 | PRJNA1242190 | 3226 | 435 | 5.78453 | 25.1627055 | Chilodonella | 151076 | SAR_Eukaryotes | SAR_Eukaryotes | 545 | 1.5799999999999996e-150 | NTclustered | gi|1389430804|gb|MH341632.1| | 1654720 | g3219 | i0 | 96.375 | 29.6689655172414 | 331 | 12 | 83 | 0 | 29 | 359 | 32 | 362 | Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence | blastn | 12906 | 545 | 1 | Eukaryota | Sar | Ciliophora | Phyllopharyngea | Chlamydodontida | Chilodonellidae | Chilodonella | Chilodonella piscicola | ||
| 8004148 | 8004148 | PRJNA1242190_S_NODE_13067_length_245_cov_2.848837_g13060_i0 | PRJNA1242190 | 13067 | 245 | 2.848837 | 6.97965065 | Sterkiella histriomuscorum | 94289 | SAR_Eukaryotes | SAR_Eukaryotes | 176 | 1.26e-39 | NTclustered | gi|47176465|gb|AY618045.1| | 94289 | g13060 | i0 | 93.966 | 46.4775510204082 | 116 | 7 | 47 | 0 | 1 | 116 | 537 | 422 | Sterkiella histriomuscorum clone UGC1O0002_L19_F genomic sequence | blastn | 11387 | 176 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Sporadotrichida | Oxytrichidae | Sterkiella | Sterkiella histriomuscorum | ||
| 8703938 | 8703938 | PRJNA1242190_S_NODE_7027_length_318_cov_5.608163_g7020_i0 | PRJNA1242190 | 7027 | 318 | 5.608163 | 17.83395834 | Sterkiella | 94288 | SAR_Eukaryotes | SAR_Eukaryotes | 169 | 2.8399999999999997e-37 | NTclustered | gi|331686195|gb|HQ432921.1| | 94289 | g7020 | i0 | 78.309 | 65.7169811320755 | 272 | 51 | 84 | 8 | 20 | 287 | 1205 | 1472 | Sterkiella histriomuscorum strain BA elongation factor-1 (ef-1) gene, complete cds; macronuclear | blastn | 20898 | 169 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Sporadotrichida | Oxytrichidae | Sterkiella | Sterkiella histriomuscorum | ||
| 10555008 | 10555008 | PRJNA1242190_S_NODE_3689_length_414_cov_3.938416_g3682_i0 | PRJNA1242190 | 3689 | 414 | 3.938416 | 16.30504224 | Chilodonella uncinata | 151077 | SAR_Eukaryotes | SAR_Eukaryotes | 737 | 0 | NTclustered | gi|300676714|gb|GQ377691.1| | 151077 | g3682 | i0 | 99.029 | 51.6594202898551 | 412 | 3 | 99 | 1 | 4 | 414 | 450 | 39 | Chilodonella uncinata rps22a (rps22a) mRNA, complete cds | blastn | 21387 | 737 | 1 | Eukaryota | Sar | Ciliophora | Phyllopharyngea | Chlamydodontida | Chilodonellidae | Chilodonella | Chilodonella uncinata | ||
| 13104753 | 13104753 | PRJNA1242190_S_NODE_13591_length_242_cov_3.597633_g13584_i0 | PRJNA1242190 | 13591 | 242 | 3.597633 | 8.70627186 | Chilodonella uncinata | 151077 | SAR_Eukaryotes | SAR_Eukaryotes | 364 | 2.4699999999999992e-96 | NTclustered | gi|301014695|gb|GQ377692.1| | 151077 | g13584 | i0 | 93.548 | 1.02479338842975 | 248 | 10 | 100 | 2 | 1 | 242 | 499 | 252 | Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence | blastn | 248 | 364 | 1 | Eukaryota | Sar | Ciliophora | Phyllopharyngea | Chlamydodontida | Chilodonellidae | Chilodonella | Chilodonella uncinata | ||
| 13804460 | 13804460 | PRJNA1242190_S_NODE_4011_length_400_cov_5.009174_g4004_i0 | PRJNA1242190 | 4011 | 400 | 5.009174 | 20.036696 | Chilodonella | 151076 | SAR_Eukaryotes | SAR_Eukaryotes | 246 | 1.64e-60 | NTclustered | gi|1389430804|gb|MH341632.1| | 1654720 | g4004 | i0 | 94.375 | 6.2025 | 160 | 9 | 40 | 0 | 1 | 160 | 2923 | 3082 | Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence | blastn | 2481 | 246 | 1 | Eukaryota | Sar | Ciliophora | Phyllopharyngea | Chlamydodontida | Chilodonellidae | Chilodonella | Chilodonella piscicola | ||
| 15653843 | 15653843 | PRJNA1242190_S_NODE_11713_length_253_cov_9.638889_g11706_i0 | PRJNA1242190 | 11713 | 253 | 9.638889 | 24.38638917 | Chilodonella uncinata | 151077 | SAR_Eukaryotes | SAR_Eukaryotes | 233 | 7.64e-57 | NTclustered | gi|33327399|gb|AF527985.1| | 151077 | g11706 | i0 | 97.778 | 69.9920948616601 | 135 | 3 | 53 | 0 | 119 | 253 | 1 | 135 | Chilodonella uncinata clone 5 histone H4 (H4) gene, partial cds | blastn | 17708 | 233 | 1 | Eukaryota | Sar | Ciliophora | Phyllopharyngea | Chlamydodontida | Chilodonellidae | Chilodonella | Chilodonella uncinata | ||
| 16928114 | 16928114 | PRJNA1242190_S_NODE_3874_length_406_cov_4.432432_g3867_i0 | PRJNA1242190 | 3874 | 406 | 4.432432 | 17.99567392 | Chilodonella uncinata | 151077 | SAR_Eukaryotes | SAR_Eukaryotes | 612 | 1.4299999999999996e-170 | NTclustered | gi|300676719|gb|GQ377693.1| | 151077 | g3867 | i0 | 95.55 | 16.4211822660099 | 382 | 17 | 94 | 0 | 25 | 406 | 699 | 318 | Chilodonella uncinata gcr5-like mRNA, partial sequence | blastn | 6667 | 612 | 1 | Eukaryota | Sar | Ciliophora | Phyllopharyngea | Chlamydodontida | Chilodonellidae | Chilodonella | Chilodonella uncinata | ||
| 20752364 | 20752364 | PRJNA1242190_S_NODE_11217_length_258_cov_3.140541_g11210_i0 | PRJNA1242190 | 11217 | 258 | 3.140541 | 8.10259578 | Chilodonella uncinata | 151077 | SAR_Eukaryotes | SAR_Eukaryotes | 394 | 3.39e-105 | NTclustered | gi|110644972|gb|DQ665918.1| | 151077 | g11210 | i0 | 94.51 | 94.922480620155 | 255 | 14 | 99 | 0 | 1 | 255 | 386 | 640 | Chilodonella uncinata clone 1 beta-tubulin gene, partial cds | blastn | 24490 | 394 | 1 | Eukaryota | Sar | Ciliophora | Phyllopharyngea | Chlamydodontida | Chilodonellidae | Chilodonella | Chilodonella uncinata | ||
| 20752368 | 20752368 | PRJNA1242190_S_NODE_1137_length_581_cov_6.525591_g1130_i0 | PRJNA1242190 | 1137 | 581 | 6.525591 | 37.91368371 | Chilodonella uncinata | 151077 | SAR_Eukaryotes | SAR_Eukaryotes | 763 | 0 | NTclustered | gi|110645063|gb|DQ665311.1| | 151077 | g1130 | i0 | 97.327 | 40.0636833046472 | 449 | 12 | 77 | 0 | 133 | 581 | 1205 | 757 | Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear | blastn | 23277 | 763 | 1 | Eukaryota | Sar | Ciliophora | Phyllopharyngea | Chlamydodontida | Chilodonellidae | Chilodonella | Chilodonella uncinata | ||
| 23303340 | 23303340 | PRJNA1242190_S_NODE_7939_length_302_cov_6.406114_g7932_i0 | PRJNA1242190 | 7939 | 302 | 6.406114 | 19.34646428 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 115 | 3.5400000000000006e-21 | NTclustered | gi|829192014|ref|XM_012799966.1| | 312017 | g7932 | i0 | 88.421 | 1.39072847682119 | 95 | 11 | 31 | 0 | 161 | 255 | 219 | 125 | Tetrahymena thermophila SB210 hypothetical protein partial mRNA | blastn | 420 | 115 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 24577202 | 24577202 | PRJNA1242190_S_NODE_3280_length_432_cov_3.286908_g3273_i0 | PRJNA1242190 | 3280 | 432 | 3.286908 | 14.19944256 | Chilodonella uncinata | 151077 | SAR_Eukaryotes | SAR_Eukaryotes | 366 | 1.3099999999999999e-96 | NTclustered | gi|300676719|gb|GQ377693.1| | 151077 | g3273 | i0 | 90.842 | 7.16898148148148 | 273 | 25 | 63 | 0 | 160 | 432 | 539 | 267 | Chilodonella uncinata gcr5-like mRNA, partial sequence | blastn | 3097 | 366 | 1 | Eukaryota | Sar | Ciliophora | Phyllopharyngea | Chlamydodontida | Chilodonellidae | Chilodonella | Chilodonella uncinata |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;