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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1241156" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1241156 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8003611 8003611 PRJNA1241156_S_NODE_64887_length_243_cov_10.210000_g64427_i0 PRJNA1241156 64887 243 10.21 24.8103 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.022   NTclustered gi|323706731|gb|CP002529.1| 985053 g64427 i0 100 0.11522633744856 28 0 12 0 145 172 336100 336127 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
10554285 10554285 PRJNA1241156_S_NODE_56169_length_261_cov_3323.192661_g55709_i0 PRJNA1241156 56169 261 3323.192661 8673.53284521 Sulfolobus acidocaldarius 2285 Archaea Archaea 54.7 0.007   NTclustered gi|969874815|gb|CP013695.1| 2285 g55709 i0 100 0.111111111111111 29 0 11 0 162 190 77471 77443 Sulfolobus acidocaldarius strain NG05B_CO5_07 chromosome blastn 29 54.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus acidocaldarius
18201685 18201685 PRJNA1241156_S_NODE_40675_length_300_cov_6.684825_g40215_i0 PRJNA1241156 40675 300 6.684825 20.054475 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 52.8 0.028   NTclustered gi|2695672541|gb|CP118754.2| 1452353 g40215 i0 100 0.0933333333333333 28 0 9 0 171 198 141713 141740 Methanosphaera sp. ISO3-F5 plasmid pNP174, complete sequence blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5
20751848 20751848 PRJNA1241156_S_NODE_67977_length_236_cov_2.088083_g67517_i0 PRJNA1241156 67977 236 2.088083 4.92787588 uncultured marine thaumarchaeote KM3_191_D11 1456079 Archaea Archaea 233 7.039999999999999e-57   NTclustered gi|663515842|gb|KF900766.1| 1456079 g67517 i0 85.088 18.1610169491525 228 34 97 0 1 228 23325 23552 Uncultured marine thaumarchaeote KM3_191_D11 genomic sequence blastn 4286 233 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote KM3_191_D11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;