RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1241156" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1241156 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5453352 5453352 PRJNA1241156_S_NODE_34465_length_317_cov_6.021898_g34005_i0 PRJNA1241156 34465 317 6.021898 19.08941666 Riggenbachiella amazonense 1921625 Platyhelminthes Platyhelminthes 52.8 0.03   NTclustered gi|1791271074|gb|MN624071.1| 1921625 g34005 i0 100 0.0883280757097792 28 0 9 0 235 262 1399 1372 Riggenbachiella amazonense isolate PI 582a4 cytochrome c oxidase subunit I (cox1) gene, complete cds; mitochondrial blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Proteocephalidea Monticelliidae Riggenbachiella Riggenbachiella amazonense
5453862 5453862 PRJNA1241156_S_NODE_73645_length_210_cov_134.652695_g73185_i0 PRJNA1241156 73645 210 134.652695 282.7706595 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 233 6.13e-57   NTclustered gi|56757963|gb|AY815390.1| 6182 g73185 i0 97.794 92.2619047619048 136 1 100 1 75 210 1779 1912 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 19375 233 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
10554483 10554483 PRJNA1241156_S_NODE_71809_length_221_cov_5.449438_g71349_i0 PRJNA1241156 71809 221 5.449438 12.04325798 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 398 2.1799999999999995e-106   NTclustered gi|60698688|gb|AY915747.1| 6182 g71349 i0 99.095 2.37556561085973 221 2 100 0 1 221 343 123 Schistosoma japonicum SJCHGC09661 protein mRNA, partial cds blastn 525 398 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
14379149 14379149 PRJNA1241156_S_NODE_47232_length_283_cov_2.683333_g46772_i0 PRJNA1241156 47232 283 2.683333 7.59383239 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.026   NTclustered gi|690523605|emb|LN075866.1| 99802 g46772 i0 100 0.0989399293286219 28 0 10 0 225 252 3938 3965 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0072974 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
16927493 16927493 PRJNA1241156_S_NODE_6094_length_477_cov_14.944700_g5646_i0 PRJNA1241156 6094 477 14.9447 71.286219 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 366 1.4599999999999993e-96   NTclustered gi|60600058|gb|AY810684.1| 6182 g5646 i0 99.02 6.38364779874214 204 2 43 0 274 477 1 204 Schistosoma japonicum SJCHGC04723 protein mRNA, partial cds blastn 3045 366 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
19475776 19475776 PRJNA1241156_S_NODE_24176_length_349_cov_169.552288_g23716_i0 PRJNA1241156 24176 349 169.552288 591.73748512 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 355 2.24e-93   NTclustered gi|56757963|gb|AY815390.1| 6182 g23716 i0 98.049 69.6991404011461 205 3 58 1 1 204 1456 1252 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 24325 355 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
23302101 23302101 PRJNA1241156_S_NODE_2079_length_700_cov_8.528158_g1784_i0 PRJNA1241156 2079 700 8.528158 59.697106 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 505 4.459999999999998e-138   NTclustered gi|60698656|gb|AY915745.1| 6182 g1784 i0 98.264 7.71142857142857 288 5 41 0 1 288 180 467 Schistosoma japonicum SJCHGC09658 protein mRNA, partial cds blastn 5398 505 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
23302535 23302535 PRJNA1241156_S_NODE_53059_length_268_cov_3211.951111_g52599_i0 PRJNA1241156 53059 268 3211.951111 8608.02897748 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 165 3.02e-36   NTclustered gi|56757963|gb|AY815390.1| 6182 g52599 i0 95.192 21.7126865671642 104 5 39 0 1 104 1359 1256 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 5819 165 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
23302794 23302794 PRJNA1241156_S_NODE_75099_length_205_cov_3372.018519_g74639_i0 PRJNA1241156 75099 205 3372.018519 6912.63796395 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 152 1.7199999999999998e-32   NTclustered gi|56757963|gb|AY815390.1| 6182 g74639 i0 98.824 44.0926829268293 85 1 42 0 121 205 1258 1342 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 9039 152 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;