contig_metadata
258 rows where analysis = "blastn", bioproject = "PRJNA1241156" and tax_phylum = "Kitrinoviricota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 349391 | 349391 | PRJNA1241156_S_NODE_12141_length_406_cov_99.269972_g11681_i0 | PRJNA1241156 | 12141 | 406 | 99.269972 | 403.03608632 | Pestivirus bovis | 3052619 | Viruses | Viruses | 580 | 4.019999999999999e-161 | NTclustered | gi|2587731848|gb|OR620203.1| | 11099 | g11681 | i0 | 95.845 | 90.5812807881773 | 361 | 12 | 88 | 3 | 1 | 359 | 360 | 1 | Bovine viral diarrhea virus 1 strain 2402UYSJ/2016, partial genome | blastn | 36776 | 580 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 349401 | 349401 | PRJNA1241156_S_NODE_13081_length_400_cov_20.408964_g12621_i0 | PRJNA1241156 | 13081 | 400 | 20.408964 | 81.635856 | Pestivirus bovis | 3052619 | Viruses | Viruses | 612 | 1.3999999999999996e-170 | NTclustered | gi|972905812|gb|KU200260.1| | 11099 | g12621 | i0 | 94.25 | 100.94 | 400 | 23 | 100 | 0 | 1 | 400 | 5004 | 4605 | Bovine viral diarrhea virus 1, partial genome | blastn | 40376 | 612 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 349405 | 349405 | PRJNA1241156_S_NODE_13241_length_399_cov_21.511236_g12781_i0 | PRJNA1241156 | 13241 | 399 | 21.511236 | 85.82983164 | Pestivirus bovis | 3052619 | Viruses | Viruses | 632 | 1.0699999999999998e-176 | NTclustered | gi|642594|gb|L35849.1|BVDP125B | 11099 | g12781 | i0 | 95.238 | 99.9147869674186 | 399 | 19 | 100 | 0 | 1 | 399 | 1092 | 694 | Bovine viral diarrhea virus (strain Draper) p125 gene, partial cds | blastn | 39866 | 632 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 349435 | 349435 | PRJNA1241156_S_NODE_1501_length_811_cov_5.867188_g1287_i0 | PRJNA1241156 | 1501 | 811 | 5.867188 | 47.58289468 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1114 | 0 | NTclustered | gi|800924332|gb|KP941591.1| | 11099 | g1287 | i0 | 91.95 | 98.0838471023428 | 795 | 64 | 98 | 0 | 17 | 811 | 2690 | 1896 | Bovine viral diarrhea virus 1 strain USMARC-55925 polyprotein gene, complete cds | blastn | 79546 | 1114 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 349566 | 349566 | PRJNA1241156_S_NODE_23041_length_353_cov_32.803226_g22581_i0 | PRJNA1241156 | 23041 | 353 | 32.803226 | 115.79538778 | Pestivirus bovis | 3052619 | Viruses | Viruses | 592 | 1.5899999999999997e-164 | NTclustered | gi|575471150|gb|KF772785.1| | 11099 | g22581 | i0 | 96.884 | 99.9660056657224 | 353 | 11 | 100 | 0 | 1 | 353 | 1726 | 1374 | Bovine viral diarrhea virus 1 isolate CC13B, complete genome | blastn | 35288 | 592 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 349637 | 349637 | PRJNA1241156_S_NODE_27321_length_339_cov_2.331081_g26861_i0 | PRJNA1241156 | 27321 | 339 | 2.331081 | 7.90236459 | Pestivirus bovis | 3052619 | Viruses | Viruses | 569 | 7.149999999999998e-158 | NTclustered | gi|1129880555|gb|KX170645.1| | 11099 | g26861 | i0 | 97.041 | 30.3451327433628 | 338 | 10 | 99 | 0 | 2 | 339 | 1287 | 950 | Bovine viral diarrhea virus 1 isolate V012 NS5A gene, partial cds | blastn | 10287 | 569 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 349725 | 349725 | PRJNA1241156_S_NODE_3301_length_580_cov_18.173184_g2908_i0 | PRJNA1241156 | 3301 | 580 | 18.173184 | 105.4044672 | Pestivirus bovis | 3052619 | Viruses | Viruses | 911 | 0 | NTclustered | gi|323229|gb|M96687.1|BVDPP | 229907 | g2908 | i0 | 95 | 99.8620689655172 | 580 | 29 | 100 | 0 | 1 | 580 | 1218 | 639 | Bovine viral diarrhea virus strain Osloss polyprotein gene, complete cds | blastn | 57920 | 911 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 349763 | 349763 | PRJNA1241156_S_NODE_35761_length_314_cov_2.132841_g35301_i0 | PRJNA1241156 | 35761 | 314 | 2.132841 | 6.69712074 | Pestivirus tauri | 3052626 | Viruses | Viruses | 555 | 1.8399999999999994e-153 | NTclustered | gi|998226330|gb|KT832820.1| | 54315 | g35301 | i0 | 98.718 | 98.531847133758 | 312 | 4 | 99 | 0 | 1 | 312 | 8754 | 8443 | Bovine viral diarrhea virus 2 strain USMARC-60767, complete genome | blastn | 30939 | 555 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 349828 | 349828 | PRJNA1241156_S_NODE_4121_length_536_cov_14.448276_g3697_i0 | PRJNA1241156 | 4121 | 536 | 14.448276 | 77.44275936 | Pestivirus bovis | 3052619 | Viruses | Viruses | 739 | 0 | NTclustered | gi|323225|gb|M96638.1|BVDP2014A | 11099 | g3697 | i0 | 92.759 | 85.2518656716418 | 511 | 37 | 95 | 0 | 1 | 511 | 686 | 176 | Bovine viral diarrhea virus nonstructural protein (p20) gene; structural protein (p14) gene, partial ORF | blastn | 45695 | 739 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 349911 | 349911 | PRJNA1241156_S_NODE_4661_length_515_cov_10.569915_g4229_i0 | PRJNA1241156 | 4661 | 515 | 10.569915 | 54.43506225 | Pestivirus bovis | 3052619 | Viruses | Viruses | 769 | 0 | NTclustered | gi|1039262062|gb|KU159365.1| | 11099 | g4229 | i0 | 94.4 | 73.4776699029126 | 500 | 28 | 97 | 0 | 16 | 515 | 1895 | 1396 | Bovine viral diarrhea virus 1 strain USII-S15 polyprotein gene, complete cds | blastn | 37841 | 769 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 350044 | 350044 | PRJNA1241156_S_NODE_55721_length_262_cov_23.904110_g55261_i0 | PRJNA1241156 | 55721 | 262 | 23.90411 | 62.6287682 | Pestivirus bovis | 3052619 | Viruses | Viruses | 230 | 1.0299999999999995e-55 | NTclustered | gi|1129879555|gb|KX170145.1| | 11099 | g55261 | i0 | 93.506 | 65.3473282442748 | 154 | 10 | 59 | 0 | 109 | 262 | 233 | 80 | Bovine viral diarrhea virus 1 isolate V100 E2 gene, partial cds | blastn | 17121 | 230 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 350133 | 350133 | PRJNA1241156_S_NODE_63281_length_247_cov_1.367647_g62821_i0 | PRJNA1241156 | 63281 | 247 | 1.367647 | 3.37808809 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 52.8 | 0.022 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g62821 | i0 | 100 | 0.11336032388664 | 28 | 0 | 11 | 0 | 1 | 28 | 15 | 42 | Carnation latent virus isolate KL, complete genome | blastn | 28 | 52.8 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 350161 | 350161 | PRJNA1241156_S_NODE_65201_length_243_cov_1.895000_g64741_i0 | PRJNA1241156 | 65201 | 243 | 1.895 | 4.60485 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.006 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g64741 | i0 | 100 | 0.580246913580247 | 29 | 0 | 12 | 0 | 1 | 29 | 13 | 41 | Carnation latent virus isolate KL, complete genome | blastn | 141 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 350193 | 350193 | PRJNA1241156_S_NODE_6841_length_462_cov_5.162291_g2561_i1 | PRJNA1241156 | 6841 | 462 | 5.162291 | 23.84978442 | Pestivirus bovis | 3052619 | Viruses | Viruses | 680 | 0 | NTclustered | gi|1129880461|gb|KX170598.1| | 11099 | g2561 | i1 | 93.275 | 99.8160173160173 | 461 | 31 | 99 | 0 | 1 | 461 | 789 | 1249 | Bovine viral diarrhea virus 1 isolate V015 NS5A gene, partial cds | blastn | 46115 | 680 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1050557 | 1050557 | PRJNA1241156_S_NODE_2121_length_692_cov_32.608629_g1824_i0 | PRJNA1241156 | 2121 | 692 | 32.608629 | 225.65171268 | Pestivirus | 11095 | Viruses | Viruses | 1146 | 0 | NTclustered | gi|2858850715|gb|PQ613791.1| | 11099 | g1824 | i0 | 96.532 | 99.9971098265896 | 692 | 24 | 100 | 0 | 1 | 692 | 5502 | 4811 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/Input polyprotein gene, complete cds | blastn | 69198 | 1151 | 0.995655951346655 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1050773 | 1050773 | PRJNA1241156_S_NODE_69601_length_230_cov_203.085561_g69141_i0 | PRJNA1241156 | 69601 | 230 | 203.085561 | 467.0967903 | Pestivirus | 11095 | Viruses | Viruses | 411 | 2.939999999999999e-110 | NTclustered | gi|800924316|gb|KP941583.1| | 11099 | g69141 | i0 | 98.696 | 99.8608695652174 | 230 | 3 | 100 | 0 | 1 | 230 | 904 | 1133 | Bovine viral diarrhea virus 1 strain USMARC-53874 polyprotein gene, complete cds | blastn | 22968 | 414 | 0.992753623188406 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1624242 | 1624242 | PRJNA1241156_S_NODE_14462_length_392_cov_3.593123_g14002_i0 | PRJNA1241156 | 14462 | 392 | 3.593123 | 14.08504216 | Pestivirus tauri | 3052626 | Viruses | Viruses | 636 | 8.139999999999998e-178 | NTclustered | gi|998226330|gb|KT832820.1| | 54315 | g14002 | i0 | 95.918 | 64.9948979591837 | 392 | 16 | 100 | 0 | 1 | 392 | 4239 | 3848 | Bovine viral diarrhea virus 2 strain USMARC-60767, complete genome | blastn | 25478 | 636 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 1624310 | 1624310 | PRJNA1241156_S_NODE_18022_length_373_cov_48.442424_g17562_i0 | PRJNA1241156 | 18022 | 373 | 48.442424 | 180.69024152 | Pestivirus bovis | 3052619 | Viruses | Viruses | 606 | 6.039999999999997e-169 | NTclustered | gi|642594|gb|L35849.1|BVDP125B | 11099 | g17562 | i0 | 95.979 | 99.9624664879357 | 373 | 15 | 100 | 0 | 1 | 373 | 1066 | 694 | Bovine viral diarrhea virus (strain Draper) p125 gene, partial cds | blastn | 37286 | 606 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1624366 | 1624366 | PRJNA1241156_S_NODE_21262_length_360_cov_6.075710_g20802_i0 | PRJNA1241156 | 21262 | 360 | 6.07571 | 21.872556 | Pestivirus bovis | 3052619 | Viruses | Viruses | 610 | 4.489999999999999e-170 | NTclustered | gi|2127986428|gb|MW732738.1| | 11099 | g20802 | i0 | 97.222 | 82.15 | 360 | 10 | 100 | 0 | 1 | 360 | 4579 | 4220 | Bovine viral diarrhea virus 1 strain PI407, complete genome | blastn | 29574 | 610 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1624445 | 1624445 | PRJNA1241156_S_NODE_2582_length_637_cov_36.510101_g2239_i0 | PRJNA1241156 | 2582 | 637 | 36.510101 | 232.56934337 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1061 | 0 | NTclustered | gi|2858850715|gb|PQ613791.1| | 11099 | g2239 | i0 | 96.703 | 99.8587127158556 | 637 | 21 | 100 | 0 | 1 | 637 | 4866 | 5502 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/Input polyprotein gene, complete cds | blastn | 63610 | 1061 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1624615 | 1624615 | PRJNA1241156_S_NODE_35882_length_313_cov_7.192593_g35422_i0 | PRJNA1241156 | 35882 | 313 | 7.192593 | 22.51281609 | Pestivirus bovis | 3052619 | Viruses | Viruses | 466 | 8.820000000000001e-127 | NTclustered | gi|2127986428|gb|MW732738.1| | 11099 | g35422 | i0 | 93.851 | 71.5846645367412 | 309 | 19 | 99 | 0 | 1 | 309 | 3801 | 4109 | Bovine viral diarrhea virus 1 strain PI407, complete genome | blastn | 22406 | 466 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1624630 | 1624630 | PRJNA1241156_S_NODE_36902_length_311_cov_1.197761_g36442_i0 | PRJNA1241156 | 36902 | 311 | 1.197761 | 3.72503671 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 52.8 | 0.029 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g36442 | i0 | 100 | 0.090032154340836 | 28 | 0 | 9 | 0 | 1 | 28 | 15 | 42 | Carnation latent virus isolate KL, complete genome | blastn | 28 | 52.8 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 1624834 | 1624834 | PRJNA1241156_S_NODE_52082_length_271_cov_1.899123_g51622_i0 | PRJNA1241156 | 52082 | 271 | 1.899123 | 5.14662333 | Pestivirus bovis | 3052619 | Viruses | Viruses | 418 | 2.13e-112 | NTclustered | gi|2148291281|gb|MZ442301.1| | 11099 | g51622 | i0 | 94.465 | 82.6974169741697 | 271 | 15 | 100 | 0 | 1 | 271 | 737 | 1007 | Bovine viral diarrhea virus 1 isolate ncpBVDV_LFPK-alphaVbeta6_PI polyprotein gene, complete cds | blastn | 22411 | 418 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1624835 | 1624835 | PRJNA1241156_S_NODE_52102_length_271_cov_1.855263_g51642_i0 | PRJNA1241156 | 52102 | 271 | 1.855263 | 5.02776273 | Pestivirus bovis | 3052619 | Viruses | Viruses | 315 | 2.87e-81 | NTclustered | gi|1129879631|gb|KX170183.1| | 11099 | g51642 | i0 | 88.213 | 51.3579335793358 | 263 | 31 | 97 | 0 | 9 | 271 | 787 | 525 | Bovine viral diarrhea virus 1 isolate V008 E2 gene, partial cds | blastn | 13918 | 315 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1625019 | 1625019 | PRJNA1241156_S_NODE_67082_length_238_cov_4.882051_g66622_i0 | PRJNA1241156 | 67082 | 238 | 4.882051 | 11.61928138 | Pestivirus tauri | 3052626 | Viruses | Viruses | 401 | 1.8399999999999994e-107 | NTclustered | gi|1129879681|gb|KX170208.1| | 54315 | g66622 | i0 | 97.059 | 99.9201680672269 | 238 | 7 | 100 | 0 | 1 | 238 | 359 | 596 | Bovine viral diarrhea virus 2 isolate V095 Erns gene, partial cds | blastn | 23781 | 401 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 1625070 | 1625070 | PRJNA1241156_S_NODE_7122_length_457_cov_34.896135_g6671_i0 | PRJNA1241156 | 7122 | 457 | 34.896135 | 159.47533695 | Pestivirus bovis | 3052619 | Viruses | Viruses | 778 | 0 | NTclustered | gi|800924328|gb|KP941589.1| | 11099 | g6671 | i0 | 97.577 | 99.2932166301969 | 454 | 11 | 99 | 0 | 1 | 454 | 10615 | 11068 | Bovine viral diarrhea virus 1 strain USMARC-55923 polyprotein gene, complete cds | blastn | 45377 | 778 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1625079 | 1625079 | PRJNA1241156_S_NODE_722_length_1405_cov_3.762115_g681_i0 | PRJNA1241156 | 722 | 1405 | 3.762115 | 52.85771575 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1639 | 0 | NTclustered | gi|2127986398|gb|MW250799.1| | 11099 | g681 | i0 | 94.15 | 85.3900355871886 | 1077 | 62 | 99 | 1 | 330 | 1405 | 6419 | 5343 | Bovine viral diarrhea virus 1 strain 63-1, complete genome | blastn | 119973 | 1639 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2325890 | 2325890 | PRJNA1241156_S_NODE_11142_length_413_cov_224.802703_g10684_i0 | PRJNA1241156 | 11142 | 413 | 224.802703 | 928.43516339 | Pestivirus | 11095 | Viruses | Viruses | 736 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g10684 | i0 | 98.789 | 99.818401937046 | 413 | 5 | 100 | 0 | 1 | 413 | 10783 | 10371 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 41225 | 736 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2325929 | 2325929 | PRJNA1241156_S_NODE_2002_length_711_cov_36.330838_g1713_i0 | PRJNA1241156 | 2002 | 711 | 36.330838 | 258.31225818 | Pestivirus | 11095 | Viruses | Viruses | 1170 | 0 | NTclustered | gi|2633549133|gb|AF220247.2| | 11099 | g1713 | i0 | 96.343 | 99.9901547116737 | 711 | 26 | 100 | 0 | 1 | 711 | 1262 | 1972 | Bovine viral diarrhea virus-1, complete genome | blastn | 71093 | 1170 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2325995 | 2325995 | PRJNA1241156_S_NODE_3182_length_589_cov_19.309524_g2798_i0 | PRJNA1241156 | 3182 | 589 | 19.309524 | 113.73309636 | Pestivirus | 11095 | Viruses | Viruses | 848 | 0 | NTclustered | gi|2419860348|dbj|LC727645.1| | 11099 | g2798 | i0 | 97.395 | 97.4227504244482 | 499 | 12 | 99 | 1 | 91 | 589 | 11640 | 11143 | Bovine viral diarrhea virus 1 Tokachi-13 RNA, nearly complete genome | blastn | 57382 | 854 | 0.992974238875878 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2900549 | 2900549 | PRJNA1241156_S_NODE_23883_length_350_cov_46.201954_g23423_i0 | PRJNA1241156 | 23883 | 350 | 46.201954 | 161.706839 | Pestivirus bovis | 3052619 | Viruses | Viruses | 597 | 3.39e-166 | NTclustered | gi|642594|gb|L35849.1|BVDP125B | 11099 | g23423 | i0 | 97.429 | 99.9457142857143 | 350 | 9 | 100 | 0 | 1 | 350 | 1066 | 717 | Bovine viral diarrhea virus (strain Draper) p125 gene, partial cds | blastn | 34981 | 597 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2900577 | 2900577 | PRJNA1241156_S_NODE_25883_length_343_cov_117.706667_g25423_i0 | PRJNA1241156 | 25883 | 343 | 117.706667 | 403.73386781 | Pestivirus bovis | 3052619 | Viruses | Viruses | 538 | 2.0399999999999992e-148 | NTclustered | gi|800924332|gb|KP941591.1| | 11099 | g25423 | i0 | 95.029 | 99.6268221574344 | 342 | 17 | 99 | 0 | 1 | 342 | 1151 | 810 | Bovine viral diarrhea virus 1 strain USMARC-55925 polyprotein gene, complete cds | blastn | 34172 | 538 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2900580 | 2900580 | PRJNA1241156_S_NODE_26003_length_343_cov_5.303333_g25543_i0 | PRJNA1241156 | 26003 | 343 | 5.303333 | 18.19043219 | Pestivirus bovis | 3052619 | Viruses | Viruses | 496 | 1.25e-135 | NTclustered | gi|378753652|gb|JN380080.1| | 1855262 | g25543 | i0 | 92.711 | 92.7521865889213 | 343 | 25 | 100 | 0 | 1 | 343 | 3874 | 4216 | Bovine viral diarrhea virus type 1a strain 6010 polyprotein gene, complete cds | blastn | 31814 | 496 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2900646 | 2900646 | PRJNA1241156_S_NODE_30183_length_330_cov_2.365854_g29723_i0 | PRJNA1241156 | 30183 | 330 | 2.365854 | 7.8073182 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.009 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g29723 | i0 | 100 | 0.172727272727273 | 29 | 0 | 9 | 0 | 302 | 330 | 34 | 6 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 57 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 2900798 | 2900798 | PRJNA1241156_S_NODE_41143_length_299_cov_4.449219_g40683_i0 | PRJNA1241156 | 41143 | 299 | 4.449219 | 13.30316481 | Pestivirus tauri | 3052626 | Viruses | Viruses | 536 | 6.3e-148 | NTclustered | gi|1129880561|gb|KX170648.1| | 54315 | g40683 | i0 | 98.997 | 99.9063545150502 | 299 | 3 | 100 | 0 | 1 | 299 | 752 | 1050 | Bovine viral diarrhea virus 2 isolate V065 NS5B gene, partial cds | blastn | 29872 | 536 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 2900805 | 2900805 | PRJNA1241156_S_NODE_41423_length_298_cov_7.050980_g40963_i0 | PRJNA1241156 | 41423 | 298 | 7.05098 | 21.0119204 | Pestivirus bovis | 3052619 | Viruses | Viruses | 484 | 2.3e-132 | NTclustered | gi|2496580377|gb|OP548503.1| | 11099 | g40963 | i0 | 95.973 | 86.3892617449664 | 298 | 12 | 100 | 0 | 1 | 298 | 4097 | 4394 | Bovine viral diarrhea virus 1 isolate USMARC_PI20734 polyprotein gene, complete cds | blastn | 25744 | 484 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2900926 | 2900926 | PRJNA1241156_S_NODE_49303_length_277_cov_18.769231_g48843_i0 | PRJNA1241156 | 49303 | 277 | 18.769231 | 51.99076987 | Pestivirus bovis | 3052619 | Viruses | Viruses | 451 | 2.15e-122 | NTclustered | gi|1129880361|gb|KX170548.1| | 11099 | g48843 | i0 | 96.029 | 99.5848375451263 | 277 | 11 | 100 | 0 | 1 | 277 | 530 | 254 | Bovine viral diarrhea virus 1 isolate V060 NS4B gene, partial cds | blastn | 27585 | 451 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2901015 | 2901015 | PRJNA1241156_S_NODE_55983_length_262_cov_2.442922_g55523_i0 | PRJNA1241156 | 55983 | 262 | 2.442922 | 6.40045564 | Pestivirus tauri | 3052626 | Viruses | Viruses | 440 | 4.369999999999998e-119 | NTclustered | gi|1003702981|gb|KT875160.1| | 54315 | g55523 | i0 | 96.947 | 99.8854961832061 | 262 | 8 | 100 | 0 | 1 | 262 | 6891 | 7152 | Bovine viral diarrhea virus 2 isolate 75W polyprotein gene, complete cds | blastn | 26170 | 440 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 2901163 | 2901163 | PRJNA1241156_S_NODE_68663_length_233_cov_15.521053_g68203_i0 | PRJNA1241156 | 68663 | 233 | 15.521053 | 36.16405349 | Pestivirus bovis | 3052619 | Viruses | Viruses | 387 | 5.03e-103 | NTclustered | gi|2496580377|gb|OP548503.1| | 11099 | g68203 | i0 | 96.567 | 99.4892703862661 | 233 | 8 | 100 | 0 | 1 | 233 | 2334 | 2566 | Bovine viral diarrhea virus 1 isolate USMARC_PI20734 polyprotein gene, complete cds | blastn | 23181 | 387 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2901249 | 2901249 | PRJNA1241156_S_NODE_8703_length_436_cov_8.694656_g8247_i0 | PRJNA1241156 | 8703 | 436 | 8.694656 | 37.90870016 | Pestivirus bovis | 3052619 | Viruses | Viruses | 614 | 4.279999999999998e-171 | NTclustered | gi|800924326|gb|KP941588.1| | 11099 | g8247 | i0 | 92.343 | 98.8142201834862 | 431 | 33 | 99 | 0 | 4 | 434 | 10140 | 9710 | Bovine viral diarrhea virus 1 strain USMARC-55922 polyprotein gene, complete cds | blastn | 43083 | 614 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3601095 | 3601095 | PRJNA1241156_S_NODE_10063_length_422_cov_29.767810_g9607_i0 | PRJNA1241156 | 10063 | 422 | 29.76781 | 125.6201582 | Pestivirus | 11095 | Viruses | Viruses | 697 | 0 | NTclustered | gi|386285713|gb|JQ418634.1| | 11099 | g9607 | i0 | 96.445 | 99.6184834123223 | 422 | 15 | 100 | 0 | 1 | 422 | 2093 | 1672 | Bovine viral diarrhea virus 1 isolate 08GB45-2 polyprotein gene, complete cds | blastn | 42039 | 697 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3601137 | 3601137 | PRJNA1241156_S_NODE_2003_length_711_cov_23.890719_g1714_i0 | PRJNA1241156 | 2003 | 711 | 23.890719 | 169.86301209 | Pestivirus | 11095 | Viruses | Viruses | 1131 | 0 | NTclustered | gi|2633549133|gb|AF220247.2| | 11099 | g1714 | i0 | 95.359 | 99.9901547116737 | 711 | 33 | 100 | 0 | 1 | 711 | 1972 | 1262 | Bovine viral diarrhea virus-1, complete genome | blastn | 71093 | 1131 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3601152 | 3601152 | PRJNA1241156_S_NODE_2263_length_675_cov_42.509494_g1012_i2 | PRJNA1241156 | 2263 | 675 | 42.509494 | 286.9390845 | Pestivirus | 11095 | Viruses | Viruses | 1131 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g1012 | i2 | 97.16 | 99.6459259259259 | 669 | 19 | 99 | 0 | 7 | 675 | 7580 | 6912 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 67261 | 1133 | 0.998234774933804 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3601166 | 3601166 | PRJNA1241156_S_NODE_2563_length_640_cov_39.453936_g2222_i0 | PRJNA1241156 | 2563 | 640 | 39.453936 | 252.5051904 | Pestivirus | 11095 | Viruses | Viruses | 1038 | 0 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g2222 | i0 | 95.938 | 99.778125 | 640 | 26 | 100 | 0 | 1 | 640 | 2188 | 1549 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 63858 | 1038 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3601183 | 3601183 | PRJNA1241156_S_NODE_2783_length_618_cov_24.756522_g1012_i3 | PRJNA1241156 | 2783 | 618 | 24.756522 | 152.99530596 | Pestivirus | 11095 | Viruses | Viruses | 902 | 0 | NTclustered | gi|404363563|gb|JX419398.1| | 11099 | g1012 | i3 | 95.871 | 95.0906148867314 | 557 | 23 | 96 | 0 | 62 | 618 | 7337 | 6781 | Bovine viral diarrhea virus 1 polyprotein gene, complete cds | blastn | 58766 | 902 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3601352 | 3601352 | PRJNA1241156_S_NODE_67023_length_238_cov_10.758974_g66563_i0 | PRJNA1241156 | 67023 | 238 | 10.758974 | 25.60635812 | Pestivirus | 11095 | Viruses | Viruses | 348 | 2.4300000000000005e-91 | NTclustered | gi|800924334|gb|KP941592.1| | 11099 | g66563 | i0 | 94.667 | 93.0924369747899 | 225 | 11 | 94 | 1 | 2 | 225 | 11573 | 11797 | Bovine viral diarrhea virus 1 strain USMARC-55926 polyprotein gene, complete cds | blastn | 22156 | 351 | 0.991452991452991 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4176762 | 4176762 | PRJNA1241156_S_NODE_16984_length_378_cov_6.128358_g16524_i0 | PRJNA1241156 | 16984 | 378 | 6.128358 | 23.16519324 | Pestivirus bovis | 3052619 | Viruses | Viruses | 582 | 1.03e-161 | NTclustered | gi|1129880061|gb|KX170398.1| | 11099 | g16524 | i0 | 94.459 | 99.4444444444444 | 379 | 19 | 100 | 2 | 1 | 378 | 894 | 517 | Bovine viral diarrhea virus 1 isolate V057 NS2 gene, partial cds | blastn | 37590 | 582 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4176850 | 4176850 | PRJNA1241156_S_NODE_2204_length_682_cov_5.145540_g1523_i1 | PRJNA1241156 | 2204 | 682 | 5.14554 | 35.0925828 | Pestivirus bovis | 3052619 | Viruses | Viruses | 874 | 0 | NTclustered | gi|542716388|gb|KF048840.1| | 11099 | g1523 | i1 | 89.868 | 99.6759530791789 | 681 | 67 | 99 | 2 | 3 | 682 | 322 | 1001 | Bovine viral diarrhea virus 1 isolate USF12 E2 glycoprotein gene, partial cds | blastn | 67979 | 874 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4177017 | 4177017 | PRJNA1241156_S_NODE_3224_length_586_cov_14.104972_g2837_i0 | PRJNA1241156 | 3224 | 586 | 14.104972 | 82.65513592 | Pestivirus bovis | 3052619 | Viruses | Viruses | 861 | 0 | NTclustered | gi|2625903271|gb|ON676186.1| | 11099 | g2837 | i0 | 93.174 | 98.0784982935154 | 586 | 40 | 100 | 0 | 1 | 586 | 11087 | 11672 | Bovine viral diarrhea virus 1 strain Jincheon, complete genome | blastn | 57474 | 861 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4177060 | 4177060 | PRJNA1241156_S_NODE_35544_length_314_cov_6.416974_g35084_i0 | PRJNA1241156 | 35544 | 314 | 6.416974 | 20.14929836 | Pestivirus bovis | 3052619 | Viruses | Viruses | 468 | 2.46e-127 | NTclustered | gi|1039262062|gb|KU159365.1| | 11099 | g35084 | i0 | 95.548 | 92.703821656051 | 292 | 13 | 93 | 0 | 23 | 314 | 8168 | 7877 | Bovine viral diarrhea virus 1 strain USII-S15 polyprotein gene, complete cds | blastn | 29109 | 468 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4177247 | 4177247 | PRJNA1241156_S_NODE_48404_length_280_cov_2.383966_g47944_i0 | PRJNA1241156 | 48404 | 280 | 2.383966 | 6.6751048 | Pestivirus bovis | 3052619 | Viruses | Viruses | 394 | 3.72e-105 | NTclustered | gi|118498778|gb|EF101530.1| | 11099 | g47944 | i0 | 92.115 | 29.775 | 279 | 22 | 99 | 0 | 2 | 280 | 9379 | 9101 | Bovine viral diarrhea virus 1 strain KE9, complete genome | blastn | 8337 | 394 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4177347 | 4177347 | PRJNA1241156_S_NODE_54724_length_265_cov_1.445946_g54264_i0 | PRJNA1241156 | 54724 | 265 | 1.445946 | 3.8317569 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.007 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g54264 | i0 | 100 | 0.532075471698113 | 29 | 0 | 11 | 0 | 237 | 265 | 41 | 13 | Carnation latent virus isolate KL, complete genome | blastn | 141 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 4878625 | 4878625 | PRJNA1241156_S_NODE_11144_length_413_cov_134.962162_g10686_i0 | PRJNA1241156 | 11144 | 413 | 134.962162 | 557.39372906 | Pestivirus | 11095 | Viruses | Viruses | 719 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g10686 | i0 | 98.063 | 99.8547215496368 | 413 | 8 | 100 | 0 | 1 | 413 | 10371 | 10783 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 41240 | 719 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4878626 | 4878626 | PRJNA1241156_S_NODE_1184_length_926_cov_22.771234_g1012_i0 | PRJNA1241156 | 1184 | 926 | 22.771234 | 210.86162684 | Pestivirus | 11095 | Viruses | Viruses | 1544 | 0 | NTclustered | gi|404363563|gb|JX419398.1| | 11099 | g1012 | i0 | 96.76 | 100 | 926 | 30 | 100 | 0 | 1 | 926 | 6217 | 7142 | Bovine viral diarrhea virus 1 polyprotein gene, complete cds | blastn | 92600 | 1544 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4878692 | 4878692 | PRJNA1241156_S_NODE_2564_length_640_cov_38.264657_g2223_i0 | PRJNA1241156 | 2564 | 640 | 38.264657 | 244.8938048 | Pestivirus | 11095 | Viruses | Viruses | 1027 | 0 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g2223 | i0 | 95.625 | 99.771875 | 640 | 28 | 100 | 0 | 1 | 640 | 2188 | 1549 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 63854 | 1033 | 0.994191674733785 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4878733 | 4878733 | PRJNA1241156_S_NODE_31564_length_325_cov_155.783688_g31104_i0 | PRJNA1241156 | 31564 | 325 | 155.783688 | 506.296986 | Pestivirus | 11095 | Viruses | Viruses | 529 | 1.1599999999999999e-145 | NTclustered | gi|459284088|gb|JX306012.1| | 11099 | g31104 | i0 | 96 | 99.9230769230769 | 325 | 13 | 100 | 0 | 1 | 325 | 762 | 438 | Bovine viral diarrhea virus 1 isolate Hamal polyprotein gene, partial cds | blastn | 32475 | 534 | 0.99063670411985 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5452988 | 5452988 | PRJNA1241156_S_NODE_11145_length_413_cov_122.651351_g10687_i0 | PRJNA1241156 | 11145 | 413 | 122.651351 | 506.55007963 | Pestivirus bovis | 3052619 | Viruses | Viruses | 697 | 0 | NTclustered | gi|1129880577|gb|KX170656.1| | 11099 | g10687 | i0 | 97.094 | 99.8450363196126 | 413 | 12 | 100 | 0 | 1 | 413 | 860 | 448 | Bovine viral diarrhea virus 1 isolate V015 NS5B gene, partial cds | blastn | 41236 | 697 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5453298 | 5453298 | PRJNA1241156_S_NODE_3105_length_594_cov_33.787659_g2723_i0 | PRJNA1241156 | 3105 | 594 | 33.787659 | 200.69869446 | Pestivirus bovis | 3052619 | Viruses | Viruses | 617 | 4.619999999999999e-172 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g2723 | i0 | 97.507 | 95.5892255892256 | 361 | 9 | 100 | 0 | 234 | 594 | 1828 | 2188 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 56780 | 617 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5453321 | 5453321 | PRJNA1241156_S_NODE_32425_length_323_cov_3.835714_g31965_i0 | PRJNA1241156 | 32425 | 323 | 3.835714 | 12.38935622 | Pestivirus bovis | 3052619 | Viruses | Viruses | 484 | 2.5199999999999998e-132 | NTclustered | gi|2127986396|gb|MW250798.1| | 11099 | g31965 | i0 | 94.839 | 71.6068111455108 | 310 | 16 | 96 | 0 | 14 | 323 | 10112 | 9803 | Bovine viral diarrhea virus 1 strain 62-2, complete genome | blastn | 23129 | 484 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5453847 | 5453847 | PRJNA1241156_S_NODE_72065_length_219_cov_17.931818_g71605_i0 | PRJNA1241156 | 72065 | 219 | 17.931818 | 39.27068142 | Pestivirus bovis | 3052619 | Viruses | Viruses | 355 | 1.32e-93 | NTclustered | gi|1129880487|gb|KX170611.1| | 11099 | g71605 | i0 | 95.872 | 99.9178082191781 | 218 | 9 | 99 | 0 | 2 | 219 | 1 | 218 | Bovine viral diarrhea virus 1 isolate V098 NS5A gene, partial cds | blastn | 21882 | 355 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5453855 | 5453855 | PRJNA1241156_S_NODE_72985_length_213_cov_712.882353_g72525_i0 | PRJNA1241156 | 72985 | 213 | 712.882353 | 1518.43941189 | Pestivirus bovis | 3052619 | Viruses | Viruses | 383 | 5.8499999999999996e-102 | NTclustered | gi|1523731873|gb|MH490943.1| | 981676 | g72525 | i0 | 99.061 | 100.788732394366 | 213 | 2 | 100 | 0 | 1 | 213 | 1033 | 821 | Bovine viral diarrhea virus 1b strain BVDV BJ-2016, complete genome | blastn | 21468 | 383 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6153361 | 6153361 | PRJNA1241156_S_NODE_2645_length_632_cov_26.044143_g2295_i0 | PRJNA1241156 | 2645 | 632 | 26.044143 | 164.59898376 | Pestivirus | 11095 | Viruses | Viruses | 636 | 1.36e-177 | NTclustered | gi|1707003|gb|U63513.1|BVU63513 | 11099 | g2295 | i0 | 97.574 | 93.8528481012658 | 371 | 9 | 59 | 0 | 3 | 373 | 840 | 1210 | Bovine viral diarrhea virus noncytopathogenic strain NCP7, polyprotein gene, E2 region to NS4B, partial cds | blastn | 59315 | 636 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6727349 | 6727349 | PRJNA1241156_S_NODE_11466_length_411_cov_7.625000_g11008_i0 | PRJNA1241156 | 11466 | 411 | 7.625 | 31.33875 | Pestivirus bovis | 3052619 | Viruses | Viruses | 582 | 1.13e-161 | NTclustered | gi|2858850717|gb|PQ613792.1| | 11099 | g11008 | i0 | 92.252 | 100.077858880779 | 413 | 28 | 100 | 3 | 1 | 411 | 2881 | 2471 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/MDBK polyprotein gene, complete cds | blastn | 41132 | 582 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6727362 | 6727362 | PRJNA1241156_S_NODE_1206_length_917_cov_9.693364_g932_i1 | PRJNA1241156 | 1206 | 917 | 9.693364 | 88.88814788 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1062 | 0 | NTclustered | gi|2127986428|gb|MW732738.1| | 11099 | g932 | i1 | 94.606 | 92.0392584514722 | 686 | 37 | 100 | 0 | 1 | 686 | 10451 | 9766 | Bovine viral diarrhea virus 1 strain PI407, complete genome | blastn | 84400 | 1062 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6727586 | 6727586 | PRJNA1241156_S_NODE_2686_length_628_cov_7.312821_g2334_i0 | PRJNA1241156 | 2686 | 628 | 7.312821 | 45.92451588 | Pestivirus bovis | 3052619 | Viruses | Viruses | 597 | 6.379999999999999e-166 | NTclustered | gi|1129880615|gb|KX170675.1| | 11099 | g2334 | i0 | 93.333 | 82.5063694267516 | 405 | 26 | 64 | 1 | 225 | 628 | 1731 | 2135 | Bovine viral diarrhea virus 1 isolate V083 NS5B gene, partial cds | blastn | 51814 | 597 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6727788 | 6727788 | PRJNA1241156_S_NODE_39746_length_303_cov_2.469231_g39286_i0 | PRJNA1241156 | 39746 | 303 | 2.469231 | 7.48176993 | Pestivirus tauri | 3052626 | Viruses | Viruses | 538 | 1.7799999999999995e-148 | NTclustered | gi|619325763|emb|HG426495.1| | 54315 | g39286 | i0 | 98.68 | 99.986798679868 | 303 | 4 | 100 | 0 | 1 | 303 | 7450 | 7752 | Bovine viral diarrhea virus 2, complete genome, isolate VOE 4407 | blastn | 30296 | 538 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 6727885 | 6727885 | PRJNA1241156_S_NODE_4686_length_514_cov_41.233546_g4253_i0 | PRJNA1241156 | 4686 | 514 | 41.233546 | 211.94042644 | Pestivirus bovis | 3052619 | Viruses | Viruses | 822 | 0 | NTclustered | gi|800924316|gb|KP941583.1| | 11099 | g4253 | i0 | 95.525 | 99.8249027237354 | 514 | 23 | 100 | 0 | 1 | 514 | 5208 | 5721 | Bovine viral diarrhea virus 1 strain USMARC-53874 polyprotein gene, complete cds | blastn | 51310 | 822 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6727923 | 6727923 | PRJNA1241156_S_NODE_49786_length_276_cov_9.158798_g49326_i0 | PRJNA1241156 | 49786 | 276 | 9.158798 | 25.27828248 | Pestivirus bovis | 3052619 | Viruses | Viruses | 460 | 3.5599999999999997e-125 | NTclustered | gi|1796903432|gb|MN442400.1| | 11099 | g49326 | i0 | 96.739 | 99.6521739130435 | 276 | 9 | 100 | 0 | 1 | 276 | 314 | 39 | Bovine viral diarrhea virus 1 isolate HN1727 N-terminal protease gene, partial cds | blastn | 27504 | 460 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6728057 | 6728057 | PRJNA1241156_S_NODE_58926_length_256_cov_1.507042_g58466_i0 | PRJNA1241156 | 58926 | 256 | 1.507042 | 3.85802752 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.006 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g58466 | i0 | 100 | 0.22265625 | 29 | 0 | 11 | 0 | 228 | 256 | 34 | 6 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 57 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 8002915 | 8002915 | PRJNA1241156_S_NODE_1827_length_739_cov_64.521552_g1559_i0 | PRJNA1241156 | 1827 | 739 | 64.521552 | 476.81426928 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1221 | 0 | NTclustered | gi|2127986428|gb|MW732738.1| | 11099 | g1559 | i0 | 96.482 | 101.732070365359 | 739 | 26 | 100 | 0 | 1 | 739 | 818 | 80 | Bovine viral diarrhea virus 1 strain PI407, complete genome | blastn | 75180 | 1221 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8002920 | 8002920 | PRJNA1241156_S_NODE_18507_length_371_cov_13.701220_g18047_i0 | PRJNA1241156 | 18507 | 371 | 13.70122 | 50.8315262 | Pestivirus bovis | 3052619 | Viruses | Viruses | 608 | 1.6699999999999992e-169 | NTclustered | gi|1129880109|gb|KX170422.1| | 11099 | g18047 | i0 | 96.226 | 100 | 371 | 14 | 100 | 0 | 1 | 371 | 1585 | 1955 | Bovine viral diarrhea virus 1 isolate V015 NS3 gene, partial cds | blastn | 37100 | 608 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8002953 | 8002953 | PRJNA1241156_S_NODE_20667_length_362_cov_206.633229_g20207_i0 | PRJNA1241156 | 20667 | 362 | 206.633229 | 748.01228898 | Pestivirus bovis | 3052619 | Viruses | Viruses | 641 | 1.5999999999999993e-179 | NTclustered | gi|800924330|gb|KP941590.1| | 11099 | g20207 | i0 | 98.619 | 99.1160220994475 | 362 | 5 | 100 | 0 | 1 | 362 | 664 | 303 | Bovine viral diarrhea virus 1 strain USMARC-55924 polyprotein gene, complete cds | blastn | 35880 | 641 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8003035 | 8003035 | PRJNA1241156_S_NODE_25867_length_344_cov_1.777409_g25407_i0 | PRJNA1241156 | 25867 | 344 | 1.777409 | 6.11428696 | Pestivirus tauri | 3052626 | Viruses | Viruses | 586 | 7.209999999999997e-163 | NTclustered | gi|1129880351|gb|KX170543.1| | 54315 | g25407 | i0 | 97.384 | 99.3168604651163 | 344 | 9 | 100 | 0 | 1 | 344 | 663 | 1006 | Bovine viral diarrhea virus 2 isolate V063 NS4B gene, partial cds | blastn | 34165 | 586 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 8003068 | 8003068 | PRJNA1241156_S_NODE_2767_length_620_cov_6.570191_g2409_i0 | PRJNA1241156 | 2767 | 620 | 6.570191 | 40.7351842 | Pestivirus bovis | 3052619 | Viruses | Viruses | 907 | 0 | NTclustered | gi|323225|gb|M96638.1|BVDP2014A | 11099 | g2409 | i0 | 93.065 | 91.7209677419355 | 620 | 43 | 100 | 0 | 1 | 620 | 686 | 67 | Bovine viral diarrhea virus nonstructural protein (p20) gene; structural protein (p14) gene, partial ORF | blastn | 56867 | 907 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8003082 | 8003082 | PRJNA1241156_S_NODE_28587_length_335_cov_2.811644_g28127_i0 | PRJNA1241156 | 28587 | 335 | 2.811644 | 9.4190074 | Pestivirus bovis | 3052619 | Viruses | Viruses | 512 | 1.21e-140 | NTclustered | gi|118498778|gb|EF101530.1| | 11099 | g28127 | i0 | 94.311 | 99.910447761194 | 334 | 19 | 99 | 0 | 1 | 334 | 3630 | 3297 | Bovine viral diarrhea virus 1 strain KE9, complete genome | blastn | 33470 | 512 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8003114 | 8003114 | PRJNA1241156_S_NODE_3027_length_599_cov_51.570144_g2650_i0 | PRJNA1241156 | 3027 | 599 | 51.570144 | 308.90516256 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1040 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g2650 | i0 | 97.997 | 99.9899833055092 | 599 | 12 | 100 | 0 | 1 | 599 | 8598 | 9196 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 59894 | 1040 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8003266 | 8003266 | PRJNA1241156_S_NODE_4087_length_538_cov_2.997980_g3664_i0 | PRJNA1241156 | 4087 | 538 | 2.99798 | 16.1291324 | Pestivirus bovis | 3052619 | Viruses | Viruses | 861 | 0 | NTclustered | gi|2127986428|gb|MW732738.1| | 11099 | g3664 | i0 | 95.547 | 99.5873605947955 | 539 | 23 | 100 | 1 | 1 | 538 | 8210 | 7672 | Bovine viral diarrhea virus 1 strain PI407, complete genome | blastn | 53578 | 861 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8003276 | 8003276 | PRJNA1241156_S_NODE_4147_length_535_cov_31.804878_g3722_i0 | PRJNA1241156 | 4147 | 535 | 31.804878 | 170.1560973 | Pestivirus bovis | 3052619 | Viruses | Viruses | 889 | 0 | NTclustered | gi|2419860346|dbj|LC727644.1| | 11099 | g3722 | i0 | 96.636 | 99.988785046729 | 535 | 18 | 100 | 0 | 1 | 535 | 8314 | 7780 | Bovine viral diarrhea virus 1 Tokachi-8 RNA, nearly complete genome | blastn | 53494 | 889 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8003341 | 8003341 | PRJNA1241156_S_NODE_4687_length_514_cov_40.802548_g4254_i0 | PRJNA1241156 | 4687 | 514 | 40.802548 | 209.72509672 | Pestivirus bovis | 3052619 | Viruses | Viruses | 773 | 0 | NTclustered | gi|800924332|gb|KP941591.1| | 11099 | g4254 | i0 | 93.786 | 99.9552529182879 | 515 | 30 | 100 | 2 | 1 | 514 | 1151 | 638 | Bovine viral diarrhea virus 1 strain USMARC-55925 polyprotein gene, complete cds | blastn | 51377 | 773 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8003502 | 8003502 | PRJNA1241156_S_NODE_5767_length_484_cov_101.950113_g5322_i0 | PRJNA1241156 | 5767 | 484 | 101.950113 | 493.43854692 | Pestivirus bovis | 3052619 | Viruses | Viruses | 808 | 0 | NTclustered | gi|800924316|gb|KP941583.1| | 11099 | g5322 | i0 | 96.694 | 99.9607438016529 | 484 | 16 | 100 | 0 | 1 | 484 | 904 | 1387 | Bovine viral diarrhea virus 1 strain USMARC-53874 polyprotein gene, complete cds | blastn | 48381 | 808 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8003539 | 8003539 | PRJNA1241156_S_NODE_60367_length_253_cov_1.528571_g59907_i0 | PRJNA1241156 | 60367 | 253 | 1.528571 | 3.86728463 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 60.2 | 1.37e-4 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g59907 | i0 | 97.143 | 0.600790513833992 | 35 | 1 | 14 | 0 | 1 | 35 | 13 | 47 | Carnation latent virus isolate KL, complete genome | blastn | 152 | 60.2 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 8703494 | 8703494 | PRJNA1241156_S_NODE_35307_length_315_cov_3.650735_g34847_i0 | PRJNA1241156 | 35307 | 315 | 3.650735 | 11.49981525 | root | 1 | Root_unresolved | Root_unresolved | 54.7 | 0.008 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g34847 | i0 | 100 | 0.46031746031746 | 29 | 0 | 9 | 0 | 287 | 315 | 41 | 13 | Carnation latent virus isolate KL, complete genome | blastn | 145 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 8703504 | 8703504 | PRJNA1241156_S_NODE_3667_length_559_cov_6.963178_g3262_i0 | PRJNA1241156 | 3667 | 559 | 6.963178 | 38.92416502 | Pestivirus | 11095 | Viruses | Viruses | 819 | 0 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g3262 | i0 | 93.023 | 99.9463327370304 | 559 | 39 | 100 | 0 | 1 | 559 | 844 | 286 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 55870 | 819 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8703508 | 8703508 | PRJNA1241156_S_NODE_37227_length_310_cov_1.891386_g36767_i0 | PRJNA1241156 | 37227 | 310 | 1.891386 | 5.8632966 | Pestivirus | 11095 | Viruses | Viruses | 418 | 2.4799999999999996e-112 | NTclustered | gi|2743179411|gb|PP856399.1| | 11099 | g36767 | i0 | 90.968 | 97.9129032258064 | 310 | 28 | 100 | 0 | 1 | 310 | 2189 | 1880 | Bovine viral diarrhea virus 1 strain PZ11, partial genome | blastn | 30353 | 418 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8703546 | 8703546 | PRJNA1241156_S_NODE_4567_length_518_cov_33.202105_g4136_i0 | PRJNA1241156 | 4567 | 518 | 33.202105 | 171.9869039 | Pestivirus | 11095 | Viruses | Viruses | 813 | 0 | NTclustered | gi|2633549133|gb|AF220247.2| | 11099 | g4136 | i0 | 94.981 | 99.9903474903475 | 518 | 26 | 100 | 0 | 1 | 518 | 1779 | 1262 | Bovine viral diarrhea virus-1, complete genome | blastn | 51795 | 813 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8703580 | 8703580 | PRJNA1241156_S_NODE_55627_length_263_cov_1.495455_g55167_i0 | PRJNA1241156 | 55627 | 263 | 1.495455 | 3.93304665 | Pestivirus | 11095 | Viruses | Viruses | 311 | 3.59e-80 | NTclustered | gi|2067731924|gb|MW528225.1| | 11099 | g55167 | i0 | 93.75 | 79.8326996197719 | 208 | 12 | 79 | 1 | 56 | 263 | 6887 | 7093 | Bovine viral diarrhea virus 1 isolate 2016BVD01436, partial genome | blastn | 20996 | 311 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9278051 | 9278051 | PRJNA1241156_S_NODE_3028_length_599_cov_36.762590_g2651_i0 | PRJNA1241156 | 3028 | 599 | 36.76259 | 220.2079141 | Pestivirus bovis | 3052619 | Viruses | Viruses | 979 | 0 | NTclustered | gi|1129880467|gb|KX170601.1| | 11099 | g2651 | i0 | 96.16 | 100 | 599 | 23 | 100 | 0 | 1 | 599 | 761 | 163 | Bovine viral diarrhea virus 1 isolate V100 NS5A gene, partial cds | blastn | 59900 | 979 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9278069 | 9278069 | PRJNA1241156_S_NODE_31268_length_326_cov_7.431095_g30808_i0 | PRJNA1241156 | 31268 | 326 | 7.431095 | 24.2253697 | Pestivirus bovis | 3052619 | Viruses | Viruses | 501 | 2.53e-137 | NTclustered | gi|1540352923|gb|MH231153.1| | 11099 | g30808 | i0 | 94.462 | 99.5613496932515 | 325 | 18 | 99 | 0 | 1 | 325 | 9353 | 9677 | Bovine viral diarrhea virus 1 isolate Nebraska polyprotein gene, complete cds | blastn | 32457 | 501 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9278409 | 9278409 | PRJNA1241156_S_NODE_55728_length_262_cov_15.858447_g55268_i0 | PRJNA1241156 | 55728 | 262 | 15.858447 | 41.54913114 | Pestivirus bovis | 3052619 | Viruses | Viruses | 429 | 9.449999999999999e-116 | NTclustered | gi|323227|gb|M96639.1|BVDP20A | 11099 | g55268 | i0 | 96.183 | 99.9923664122137 | 262 | 10 | 100 | 0 | 1 | 262 | 499 | 238 | Bovine viral diarrhea virus nonstructural proteins (p125/p80, p20) partial cds | blastn | 26198 | 429 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9278517 | 9278517 | PRJNA1241156_S_NODE_63188_length_247_cov_1.887255_g62728_i0 | PRJNA1241156 | 63188 | 247 | 1.887255 | 4.66151985 | Pestivirus bovis | 3052619 | Viruses | Viruses | 392 | 1.1599999999999999e-104 | NTclustered | gi|1129880051|gb|KX170393.1| | 11099 | g62728 | i0 | 95.528 | 97.3117408906883 | 246 | 9 | 99 | 2 | 3 | 247 | 1199 | 955 | Bovine viral diarrhea virus 1 isolate V092 NS2 gene, partial cds | blastn | 24036 | 392 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9278550 | 9278550 | PRJNA1241156_S_NODE_65888_length_241_cov_19.136364_g65428_i0 | PRJNA1241156 | 65888 | 241 | 19.136364 | 46.11863724 | Pestivirus bovis | 3052619 | Viruses | Viruses | 385 | 1.88e-102 | NTclustered | gi|1707003|gb|U63513.1|BVU63513 | 11099 | g65428 | i0 | 95.436 | 100.98755186722 | 241 | 11 | 100 | 0 | 1 | 241 | 1017 | 777 | Bovine viral diarrhea virus noncytopathogenic strain NCP7, polyprotein gene, E2 region to NS4B, partial cds | blastn | 24338 | 385 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9278568 | 9278568 | PRJNA1241156_S_NODE_6708_length_464_cov_10.691211_g6259_i0 | PRJNA1241156 | 6708 | 464 | 10.691211 | 49.60721904 | Pestivirus bovis | 3052619 | Viruses | Viruses | 774 | 0 | NTclustered | gi|1129880597|gb|KX170666.1| | 11099 | g6259 | i0 | 96.767 | 99.9418103448276 | 464 | 15 | 100 | 0 | 1 | 464 | 1093 | 1556 | Bovine viral diarrhea virus 1 isolate V098 NS5B gene, partial cds | blastn | 46373 | 774 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9278570 | 9278570 | PRJNA1241156_S_NODE_67128_length_238_cov_3.841026_g66668_i0 | PRJNA1241156 | 67128 | 238 | 3.841026 | 9.14164188 | Pestivirus bovis | 3052619 | Viruses | Viruses | 339 | 1.4699999999999999e-88 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g66668 | i0 | 92.405 | 83.6932773109244 | 237 | 18 | 99 | 0 | 2 | 238 | 2391 | 2627 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 19919 | 339 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9278653 | 9278653 | PRJNA1241156_S_NODE_76748_length_200_cov_274.649682_g76288_i0 | PRJNA1241156 | 76748 | 200 | 274.649682 | 549.299364 | Pestivirus bovis | 3052619 | Viruses | Viruses | 337 | 4.28e-88 | NTclustered | gi|5714458|gb|AF145363.1|AF145363 | 11099 | g76288 | i0 | 97 | 99.825 | 200 | 6 | 100 | 0 | 1 | 200 | 428 | 229 | Pestivirus type 1 strain NY-1 Npro gene, partial cds | blastn | 19965 | 337 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9978669 | 9978669 | PRJNA1241156_S_NODE_24468_length_348_cov_19.829508_g24008_i0 | PRJNA1241156 | 24468 | 348 | 19.829508 | 69.00668784 | Pestivirus | 11095 | Viruses | Viruses | 580 | 3.3999999999999986e-161 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g24008 | i0 | 96.83 | 99.9080459770115 | 347 | 11 | 99 | 0 | 1 | 347 | 4105 | 3759 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 34768 | 580 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9978730 | 9978730 | PRJNA1241156_S_NODE_38368_length_306_cov_30.615970_g37908_i0 | PRJNA1241156 | 38368 | 306 | 30.61597 | 93.6848682 | Pestivirus | 11095 | Viruses | Viruses | 521 | 1.8099999999999995e-143 | NTclustered | gi|1129880361|gb|KX170548.1| | 11099 | g37908 | i0 | 97.386 | 99.6535947712418 | 306 | 8 | 100 | 0 | 1 | 306 | 530 | 225 | Bovine viral diarrhea virus 1 isolate V060 NS4B gene, partial cds | blastn | 30494 | 521 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9978749 | 9978749 | PRJNA1241156_S_NODE_4468_length_522_cov_44.484342_g4039_i0 | PRJNA1241156 | 4468 | 522 | 44.484342 | 232.20826524 | Pestivirus | 11095 | Viruses | Viruses | 920 | 0 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g4039 | i0 | 98.467 | 99.9195402298851 | 522 | 8 | 100 | 0 | 1 | 522 | 11334 | 10813 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 52158 | 920 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 10553621 | 10553621 | PRJNA1241156_S_NODE_13089_length_400_cov_15.044818_g12629_i0 | PRJNA1241156 | 13089 | 400 | 15.044818 | 60.179272 | Pestivirus bovis | 3052619 | Viruses | Viruses | 608 | 1.809999999999999e-169 | NTclustered | gi|800924330|gb|KP941590.1| | 11099 | g12629 | i0 | 95.078 | 96.35 | 386 | 19 | 97 | 0 | 15 | 400 | 8564 | 8179 | Bovine viral diarrhea virus 1 strain USMARC-55924 polyprotein gene, complete cds | blastn | 38540 | 608 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 10553748 | 10553748 | PRJNA1241156_S_NODE_20669_length_362_cov_150.150470_g20209_i0 | PRJNA1241156 | 20669 | 362 | 150.15047 | 543.5447014 | Pestivirus bovis | 3052619 | Viruses | Viruses | 608 | 1.619999999999999e-169 | NTclustered | gi|800924330|gb|KP941590.1| | 11099 | g20209 | i0 | 96.961 | 99.9171270718232 | 362 | 11 | 100 | 0 | 1 | 362 | 664 | 303 | Bovine viral diarrhea virus 1 strain USMARC-55924 polyprotein gene, complete cds | blastn | 36170 | 608 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 10553779 | 10553779 | PRJNA1241156_S_NODE_2249_length_676_cov_47.921011_g1939_i0 | PRJNA1241156 | 2249 | 676 | 47.921011 | 323.94603436 | Pestivirus bovis | 3052619 | Viruses | Viruses | 778 | 0 | NTclustered | gi|1129879565|gb|KX170150.1| | 11099 | g1939 | i0 | 92.897 | 83.6952662721893 | 535 | 38 | 79 | 0 | 142 | 676 | 4 | 538 | Bovine viral diarrhea virus 1 isolate V098 E2 gene, partial cds | blastn | 56578 | 778 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;