RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1241156" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA1241156 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4176766 4176766 PRJNA1241156_S_NODE_17144_length_377_cov_9.323353_g16684_i0 PRJNA1241156 17144 377 9.323353 35.14904081 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.01   NTclustered gi|2309594316|gb|OP536747.1| 10244 g16684 i0 100 7.69230769230769 29 0 8 0 277 305 119274 119302 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
5453834 5453834 PRJNA1241156_S_NODE_70905_length_226_cov_6.661202_g70445_i0 PRJNA1241156 70905 226 6.661202 15.05431652 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.02   NTclustered gi|9964314|ref|NC_002520.1| 28321 g70445 i0 94.286 0.154867256637168 35 1 15 1 104 137 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;