RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1240805" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1240805 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
349282 349282 PRJNA1240805_P_NODE_1801_length_361_cov_5.589744_g1752_i0 PRJNA1240805 1801 361 5.589744 20.17897584 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 54.7 0.01   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g1752 i0 100 0.0803324099722992 29 0 8 0 1 29 58 86 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
349334 349334 PRJNA1240805_P_NODE_5561_length_193_cov_6.111111_g5512_i0 PRJNA1240805 5561 193 6.111111 11.79444423 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g5512 i0 100 0.150259067357513 29 0 15 0 165 193 44 16 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
13103295 13103295 PRJNA1240805_P_NODE_5971_length_187_cov_4.268116_g5922_i0 PRJNA1240805 5971 187 4.268116 7.98137692 Blacklegged tick picorna-like virus 2 2080259 Viruses Viruses 283 5.209999999999999e-72   NTclustered gi|1338075553|gb|MG647772.1| 2080259 g5922 i0 97.59 7.61497326203209 166 3 88 1 1 165 368 203 Blacklegged tick picorna-like virus 2 isolate RTS-11.3 hypothetical protein gene, partial cds blastn 1424 283 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Blacklegged tick picorna-like virus 2
18201181 18201181 PRJNA1240805_P_NODE_4715_length_210_cov_13.832298_g4666_i0 PRJNA1240805 4715 210 13.832298 29.0478258 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 331 2.11e-86   NTclustered gi|2754692002|gb|PP872741.1| 3003959 g4666 i0 98.404 0.895238095238095 188 3 90 0 17 204 8443 8630 MAG: Picornavirales sp. isolate TC-PLV-185 MR233-17E/652 genomic sequence blastn 188 331 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
19475513 19475513 PRJNA1240805_P_NODE_6816_length_175_cov_12.674603_g6767_i0 PRJNA1240805 6816 175 12.674603 22.18055525 Marnaviridae sp. 2715102 Viruses Viruses 65.8 1.89e-6   NTclustered gi|2196309042|gb|MZ679248.1| 2715102 g6767 i0 78.182 0.628571428571429 110 18 61 5 38 144 1216 1110 MAG: Marnaviridae sp. isolate R65-k141_733993 hypothetical protein gene, complete cds blastn 110 65.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Marnaviridae sp.
22026218 22026218 PRJNA1240805_P_NODE_5818_length_189_cov_6.978571_g5769_i0 PRJNA1240805 5818 189 6.978571 13.18949919 Sobemovirus sp. 2809869 Viruses Viruses 95.3 2.66e-15   NTclustered gi|2171145024|gb|MZ218240.1| 2809869 g5769 i0 78.205 102.148148148148 156 28 81 6 9 162 5309 5158 MAG: Sobemovirus sp. isolate 267-k141_60134 genomic sequence blastn 19306 95.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;